Sphingobium indicum UT26S: SJA_C1-29000
Help
Entry
SJA_C1-29000 CDS
T01201
Symbol
tlyC
Name
(GenBank) putative hemolysin
KO
K03699
magnesium and cobalt exporter, CNNM family
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-29000 (tlyC)
02042 Bacterial toxins [BR:
sjp02042
]
SJA_C1-29000 (tlyC)
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C1-29000 (tlyC)
Bacterial toxins [BR:
sjp02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
SJA_C1-29000 (tlyC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNNM
CorC_HlyC
CBS
Colicin_V
Motif
Other DBs
NCBI-ProteinID:
BAI97734
UniProt:
D4Z552
LinkDB
All DBs
Position
1:complement(2896832..2898148)
Genome browser
AA seq
438 aa
AA seq
DB search
MANIPPHAPTPFPWVDLVIILALVALNGLFAMSELAIVSARRPRLQAMEKAGRRGARSAL
AAASDPGKFLSTVQIGITLIGIVAGAYSGASLGGPTGERLQMLGLSPNAAQNAGFALVIG
LTTYASLIVGELVPKQFALRAPEPIAVLVAGPMLWLAKLTAPIVWLLDGSSALIFRLLRM
TRESEQHVTAEELHLIVAEASRSGVIEESERAIISGVVRLADRPVREVMTQRMDVDWIDI
HADEDAIRAKLLDTPHTRLPVGRGTVEDIIGVVQARDIMTALFRGEGLNLETLMRKVEVV
PDQVDAMDALEVLRRAEVPMVMVHDEYGHFEGIATPADLLSAIAGHFVSDLDSADEPELV
EREDGSLLVSGQMPVDLLADRIGIDLPEDRDYATVAGHALWLLKRLPEVGDFIDDQGWRF
EIVDMDGRKIDKLLIAER
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatccccccgcacgctccgacgccctttccctgggtcgacctcgtcatcatc
ctggcgctggtcgcgctgaacggcctgttcgccatgtcggaactggccatcgtctccgcc
cgcaggccgcgcctccaggcgatggagaaggccgggcggcgcggggcgcgctccgcgctg
gcggcggcgagcgatcccggcaagttcctttccaccgtgcagatcggcatcaccctgatc
ggcatcgtcgcgggcgcctattccggggccagcctgggcgggccgaccggcgagcgattg
cagatgctgggcctgtcgcccaacgccgcgcaaaatgccggtttcgcgctggtgatcggc
cttaccacctatgcctcgctgatcgtcggcgaactggtgcccaagcagttcgccctgcgc
gctccggaaccgatcgcggtgctggtcgccgggccgatgctgtggctggcgaagctgacc
gcgcccatcgtctggctgctggacgggtccagcgcccttatcttccgcctgctgcgaatg
acccgcgaatcggaacagcatgtgacggcggaggaactgcacctgatcgtcgccgaagcc
agcaggtccggcgtgatcgaggagagcgagcgggccatcatctccggcgtcgtccgcctg
gccgaccgtccggtgcgcgaggtgatgacccagcgcatggacgtggactggatcgacatc
cacgccgatgaggatgcgattcgcgccaagctgctcgacacgccgcacacgcgcctgccg
gtgggccggggcacggtggaggacatcataggcgtcgtgcaggcgcgcgacatcatgacg
gcgctgttccggggcgaggggctgaacctcgaaaccctgatgcgcaaggtggaggtggtg
cccgaccaggtcgacgccatggacgcgctggaggtgctgcgccgggccgaggtgccgatg
gtcatggtgcatgacgaatatggccatttcgaagggatcgcgacgcccgccgacctgctg
tcggccattgccggccatttcgtgtccgacctggacagcgcggacgagcctgaactggtc
gagcgggaggatggcagcctgctggtgtcggggcagatgccggtcgacctgctggcggac
cggatcggcatcgacctgccggaggatcgcgactatgcgacggtcgccggccatgcgctg
tggctgctcaagcgcttgccggaggtgggcgatttcatcgacgatcagggctggcggttc
gagatcgtggacatggacggacgcaagatcgacaagctgctgatcgcggaacgatag
DBGET
integrated database retrieval system
