Sphingobium indicum UT26S: SJA_C1-31390
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Entry
SJA_C1-31390 CDS
T01201
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJA_C1-31390 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-31390 (ung)
Enzymes [BR:
sjp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SJA_C1-31390 (ung)
DNA repair and recombination proteins [BR:
sjp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SJA_C1-31390 (ung)
Prokaryotic type
SJA_C1-31390 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAI97973
UniProt:
D4Z5U1
LinkDB
All DBs
Position
1:3116395..3117090
Genome browser
AA seq
231 aa
AA seq
DB search
MSDTIRLDESWRAPLLGEFESPYMQGLKRFLEEEKRQGKRIFPKGSEYFRALDLTPLDKV
KVVVLGQDPYHGEGQAHGLCFSVKPGVRTPPSLVNIYKELQSDLGLRPPRHGFLEHWARQ
GVLLLNSVLTVEMGKAASHQKRGWEQFTDAIIRLVNQKNEPVVFLLWGSYAQRKAEFVDR
TRHLVLKAAHPSPLSAHNGFLGCRHFSQANAFLEEKGRGAIDWGLPETVAA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatcaggctggacgagagctggcgcgccccgctgctcggcgaattcgaa
agcccctatatgcaggggctgaagcgctttcttgaggaggagaagcgtcagggcaagcgc
atcttccccaagggcagcgaatatttccgggcgctggatctgacgccgctggacaaggtg
aaggtggtggtgctggggcaggacccctatcatggcgaggggcaggcgcatgggctgtgc
ttcagcgtgaagccgggcgtgcggacgccgccatcgctggtcaatatctacaaggaattg
cagagcgacctcggcctgcggccgccgcgccacggtttcctggaacattgggcgcggcag
ggcgtgctgctgctgaacagcgtgctgacggtggagatgggcaaggccgcgtcgcaccag
aagcgcggctgggagcagttcaccgacgccatcatccggctggtcaaccagaagaacgag
cccgtcgtgttcctgctgtggggcagctatgcgcagcgcaaggcggaatttgtggaccgc
acgcggcatctggtgctgaaggcggcgcacccctcccccctttcggcgcataacggcttt
ctggggtgcaggcatttttcgcaggccaacgcctttctggaggagaaggggcgcggggcg
atcgactggggcttgccggaaacggtggcggcatga
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