KEGG   Sphingobium indicum UT26S: SJA_C1-32220
Entry
SJA_C1-32220      CDS       T01201                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp00230  Purine metabolism
sjp00240  Pyrimidine metabolism
sjp01100  Metabolic pathways
sjp01232  Nucleotide metabolism
Module
sjp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sjp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SJA_C1-32220 (nrdA)
   00240 Pyrimidine metabolism
    SJA_C1-32220 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjp03400]
    SJA_C1-32220 (nrdA)
Enzymes [BR:sjp01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SJA_C1-32220 (nrdA)
DNA repair and recombination proteins [BR:sjp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SJA_C1-32220 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BAI98056
UniProt: D4Z624
LinkDB
Position
1:3205313..3207508
AA seq 731 aa
MKLWHYPLYRVNGGYPTDCDRTNRAASRREAVFALAIAPAGPISVPDRVDNAIFVRPGRQ
RLDRIERNRNIRELVMDFRDSEQVSASDVATVIDEVVETVADKKKAPVPAEGALVDGAPA
PKADPTPDSSTVLERRFHVVTDASRDALLTDFGKDTLQDRYLLPGESYQDLFARVAAAYA
DDADHAQRVYDYISRLWFMPATPVLSNGGTGRGLPISCYLNSVDDSLEGIVNTWNENVWL
ASRGGGIGTYWGNVRGIGEPVGLNGKTSGIIPFVRVMDSLTLAISQGSLRRGSAACYLDI
SHPEIEEFLEIRKTSGDFNRKALNLHHGVLLTDEFMEAVRDGKEFALRSPKDQSVRGSVN
ARALFQKLVEVRLATGEPYIVFNDTVNRTMPKHHRDLGLKVSTSNLCSEITLPTGRDHIG
NDRTAVCCLSSLNLETWDEWKDDRQFVEDVMRFLDNVLQDYIDRAPPEMARAKYSASRER
SVGLGVMGFHSFLQARGLPFEGAMAKSWNLRIFKHVNEKVNEASMQLAVERGPCPDAADM
GVMERFSCKMAIAPTASISIICGGASACIEPIPANIYTHKTLSGSFAVKNPYLEKLLVAK
AKDSTAVWNSILEKGGSVQHLDFLSQEEKDVFKTSFEIDQRWLLELAADRTPYIDQAQSL
NLFIPADVEKWDLLMLHYRAWELGIKSLYYLRSKSVQRAGFAGGVEADNTIDAPKFEIGE
TTDYDECLACQ
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaagctgtggcactatcccttgtatcgggttaacgggggttacccaacagattgtgat
cgaaccaaccgggccgcttcccggagggaggctgtttttgcccttgcgatcgcgcctgct
ggccccatctccgtgcctgaccgggtcgataatgctatattcgttcggcccggccggcag
cggcttgaccgaatcgaacgaaacaggaacattcgggagctggtcatggattttcgagac
agcgaacaggtgagtgcaagcgacgtggcaaccgtgattgacgaagtggtcgaaaccgtg
gcggacaagaagaaggctcccgttcccgccgagggggcgctggtcgatggggcgcctgcg
cccaaggccgacccgacgccggattcctccaccgtgctggagcgccgcttccatgtcgtg
accgacgccagccgcgacgcgctgctgaccgatttcggcaaggacacgttgcaggaccgc
tatctgctgcccggcgaatcctatcaggatctgttcgcccgcgtcgccgccgcctatgcc
gacgacgccgaccatgcccagcgcgtctacgactatatctcgcgcctctggttcatgccc
gccacgcccgtcctgtcgaacggcggcaccgggcgcggcctgccgatcagttgctatctc
aacagcgtggacgacagcctggaaggcatcgtcaacacctggaacgagaatgtctggctg
gccagccggggcggcggcatcggcacctattggggcaatgtgcgcggcatcggggagccg
gtgggcctgaacggcaagaccagcggcatcatccccttcgtgcgcgtgatggacagcctt
accctcgcgatcagccagggcagcctgcgtcgcggctcggccgcctgctatctcgacatc
tcccatccggagatcgaggagttcctcgaaatccgcaagaccagcggcgacttcaaccgc
aaggcgctgaacctgcaccatggcgtcctgctgaccgacgaattcatggaggcggtgcgc
gacggcaaggaattcgccctacgcagcccgaaggaccagtcggtgcgcggcagcgtcaac
gcccgcgccctgttccagaagctggtggaggtccgcctcgccaccggcgaaccctatatc
gtcttcaacgacaccgtgaaccgcacgatgcccaagcatcaccgcgatctagggctcaag
gtgtcgacctccaacctctgttccgaaatcactttgccgacgggtcgcgaccatatcggc
aatgaccgcacggccgtctgctgtctttcctctctcaacctggaaacctgggacgagtgg
aaggacgacaggcagtttgtcgaggatgtcatgcgcttcctcgacaatgtgctgcaggac
tatatcgaccgcgcgccgccggaaatggcgcgggcgaaatatagtgcgagccgtgaacgg
tcggtgggcctgggggtcatggggttccactccttcctccaggcccgcggacttcccttc
gaaggggcgatggccaaatcgtggaacctgcgcatcttcaagcatgtcaacgagaaggtg
aacgaagcctcgatgcagctcgcggtcgagcgcggcccgtgcccggacgccgccgacatg
ggcgtgatggagcgtttctcctgcaagatggcgatcgcgccgaccgcgtcgatcagcatc
atctgcggcggcgcgtcggcctgcatcgaaccgatcccggcgaacatctacacgcacaag
acgctgtccggcagcttcgcggtgaagaatccatacctcgaaaagctgctggtggcgaag
gccaaggacagcacggcggtctggaactcgatcctggaaaagggcggcagcgtccagcat
ctcgacttcctgagccaggaggaaaaggacgtcttcaagaccagtttcgagatcgaccag
cgctggctgctcgaactggccgccgaccgcacgccctatatcgaccaggcgcagtcgctc
aacctcttcatccccgccgacgtggagaaatgggatctgctgatgctccactaccgggca
tgggaactgggcatcaagtcgctctattatctgcgctccaagtccgtccagcgcgccggc
ttcgcgggcggcgtggaagccgacaacaccatcgacgcccccaaattcgaaatcggcgag
accaccgactatgacgagtgcctcgcctgccagtga

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