Sphingobium indicum UT26S: SJA_C1-32460
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Entry
SJA_C1-32460 CDS
T01201
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJA_C1-32460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjp01007
]
SJA_C1-32460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-32460 (lysS)
Enzymes [BR:
sjp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SJA_C1-32460 (lysS)
Amino acid related enzymes [BR:
sjp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SJA_C1-32460 (lysS)
Transfer RNA biogenesis [BR:
sjp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SJA_C1-32460 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BAI98080
UniProt:
D4Z648
LinkDB
All DBs
Position
1:3226526..3228106
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AA seq
526 aa
AA seq
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MTVSEIIRTAAQASKAWPYEEARKLLKRYQNGAPEKGHVLFETGYGPSGLPHIGTFNEVL
RTTMVRNAYHALSDIPTRLIAFSDDMDGLRKVPDNVPNQAMLAQHLGKPLTQVPDPFEKF
ESFAHHNNAMLREFLDRFGFDYEFVSATERYRSGAFDDALKNVLRHYRDIMDIMLPTLRK
ERQATYSPVLPISPKTGIVLQVPVEVIDADRGIVRFEDEGDVIEQSILSGGAKLQWKVDW
AMRWVALGVDYEMAGKDLIDSVTQSSKICRALGARPPEGFNYEMFLDEKGEKISKSKGNG
LSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYPNQPVEQQLGNP
VHHIHDGKLPEGRLPVTFGLLLNLVGVMGDASREQVWGYLQNYVANANAQSYPELDALIG
HALAYHRDFVAPTLRRRAPTDSEAAALRRLDAELAALPEGATAEDIQNIVYAIGKDEAYG
FAELRDWFKALYQTLLGADQGPRMGSFIALYGVENSRRLIAEALAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtccgaaatcatccgcaccgccgcgcaggcgtccaaggcctggccctatgag
gaagcgcgcaagctcctgaagcgctatcagaacggcgcgcccgaaaagggccatgtgctg
ttcgaaaccggctacggtccgtcgggcctgccgcatatcggcacgttcaacgaagtgctg
cgcaccaccatggtccgcaacgcctatcatgcgctgtcggacatccccacccgcctgatc
gcgttcagcgacgacatggacgggctgcgcaaggtgcccgacaatgtccccaaccaggcg
atgctggcgcagcatctgggcaagccgttgacgcaggtgcccgacccgttcgagaagttc
gagagcttcgcgcaccacaacaacgccatgctgcgggaatttctcgaccgcttcggcttc
gattacgagttcgtctccgccacggaacgctacaggtccggcgcgttcgacgacgcgctg
aaaaacgtcctgcgccactatcgggacatcatggacatcatgctgccgaccctgcgcaag
gaacggcaggcgacctattccccggtcctgccgatcagcccgaagacgggcatcgtgctg
caagtgccggtggaggtgatcgacgccgaccgcggcatcgtccgcttcgaggatgaaggc
gacgtcatcgaacagtcgatcctgtcgggcggcgcgaagctgcaatggaaggtcgactgg
gcgatgcgctgggtcgcgctgggcgtcgattatgagatggcgggcaaggatctgatcgat
tccgtcacccagtcgtcgaaaatctgccgcgcgctcggcgcccgcccgcccgaaggcttc
aattacgagatgttcctcgacgaaaagggcgagaagatctccaagtccaagggcaacggc
ctcagcctggagcaatggctgacctatggcccgcaggagagcctcgccttctacgcctat
cgcgagccgaagaaggccaagcaactccacatgggcgtcatcccccgcgccgtggacgaa
tattggcagttccgcggcaattatccgaaccagccggtcgaacagcaactcggcaatccg
gtccaccacatccatgacggcaagctgccggagggccgcctgccggtgacgttcggcctg
ctgctgaacctggtcggcgtgatgggcgacgccagccgcgaacaggtctggggctatctg
cagaactatgtcgcgaacgccaatgcgcaaagctatccggaactggacgcgctgatcggc
cacgcgctcgcctatcaccgcgatttcgtcgccccgacgctcaggcgccgcgcccccacc
gacagcgaggccgccgccctgcgcaggctggacgcggaactcgccgccctgccggaaggc
gccacggcggaggacatccagaacatcgtctacgccatcggcaaggacgaggcctatggc
tttgccgaactgcgcgactggttcaaggcgctctaccagacgctgctgggcgcggaccaa
gggccgcgcatgggcagcttcatcgcgctctacggcgtggagaacagccgccgcctgatc
gcggaggcgctggccgcctga
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