Sphingobium indicum UT26S: SJA_C1-33290
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Entry
SJA_C1-33290 CDS
T01201
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJA_C1-33290 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjp01007
]
SJA_C1-33290 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-33290 (cysS)
Enzymes [BR:
sjp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SJA_C1-33290 (cysS)
Amino acid related enzymes [BR:
sjp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SJA_C1-33290 (cysS)
Transfer RNA biogenesis [BR:
sjp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SJA_C1-33290 (cysS)
Prokaryotic type
SJA_C1-33290 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
CysS_C
SSF
Motif
Other DBs
NCBI-ProteinID:
BAI98163
UniProt:
D4Z6D1
LinkDB
All DBs
Position
1:3312707..3314236
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AA seq
509 aa
AA seq
DB search
MSDQFTPAQQHADAPLRLFNSLTRAVEPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVF
TDTLRRTLLWKGLDVTHIINITDVGHLTSDADAGDDKMEAAARAQAKSIWDIAAHYTDAF
KRNIADLNIIPPSEWTVATDYVPQMIAFAEKIAPAHCYELESGLYFDSSSVPDYGALAGG
RDDAAHARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARL
GHPFDIHTGGIDHREIHHPNEIAQNQAFHGCCGEADAAAAGFTGARWWMHNNFLVDRQGK
MSKSKGGFTTLFSLIDAGVHPLAYRLLCLGAHYRSELEFSAESVSAALTRLKRLVMGVEN
LKARAEGVTWQSLRLDWLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEETIAMKKVP
VDEKLCLLAAFDQALGLNLLTIGRADLRIQPRDAQIAPEEIEAELDHRQAARAEKDFALS
DEIRDALIARGVEVMDGDPLRWDWRLALA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccagttcacccccgcgcagcagcatgccgacgcgcccctgcggctgttcaac
agcctgacgcgcgcggtcgaacccttcgcgccgatccagccgaaccatgcccgcgtctac
agctgcggcccgaccgtctataattacgcccatctcggcaatctgcgcgcttatgtcttc
accgacacgctgcgccgcaccttgctgtggaaggggctggacgtcacccacatcatcaac
atcaccgatgtcggccacctgaccagcgacgccgacgccggggacgacaagatggaggcc
gccgcccgcgcccaggcgaagagcatctgggacatagcggcccattataccgacgccttc
aagcgcaacatcgcggacctcaatatcattccgcccagcgaatggacggtcgccaccgac
tatgtgccgcagatgatcgcctttgcggagaagatcgcgcccgcccattgctacgaactg
gaaagcggcctttatttcgacagcagcagcgtgcctgattatggcgcgcttgccggcggg
cgcgacgacgcggcccatgcccgcatcgatcctgtcgcaggcaagcgcaaccccagcgac
ttcgccatatggcgcaagtccccgccgggcgagcagcggcagatggaatgggactccccc
tggggcaagggcgcgccgggctggcacctcgaatgctcggtgatgagcgaggcgcggctg
ggccatccgttcgacatccacaccggcggcatcgaccatcgcgaaatccaccatcccaac
gagatcgcgcagaaccaggcatttcatggctgctgcggcgaagcggacgcggcggcggcg
ggttttaccggcgcccgctggtggatgcacaataatttcctggtcgaccggcaggggaag
atgagcaagtcgaagggcggcttcaccaccctcttctcgctgatcgacgcgggcgtgcat
ccgctcgcctatcgcctgctgtgcctgggcgcccattatcgcagcgaactggaattcagc
gcggagagcgtgagcgccgcgctcacccggctgaaacgcctggtcatgggcgtggaaaat
ctgaaggcgcgggccgagggcgtgacatggcagtcgctgcgcctcgactggctgcgcgcc
aatctgcatcccaaactcgctcccttgctcgaacagttcgacgcggcgatcagcgatgac
ctgatgacgccccgcgcgcttcccctgctggaagaaaccatcgccatgaagaaggtgccg
gtggacgaaaagctctgcctgcttgcggctttcgatcaggcgctgggcctcaacctgctg
accatcggccgcgccgatctgcgcatccagcccagggacgcgcagatcgcgccggaagag
atcgaagcagaactcgaccaccgccaggccgcccgcgccgaaaaggacttcgctctgtcg
gacgagatacgcgacgccctgatcgcgcgcggggtggaagtgatggacggcgatccgctg
cgctgggactggcggttggcgctggcttga
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