Sphingobium indicum UT26S: SJA_C1-33770
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Entry
SJA_C1-33770 CDS
T01201
Name
(GenBank) putative AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SJA_C1-33770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjp03019
]
SJA_C1-33770
03009 Ribosome biogenesis [BR:
sjp03009
]
SJA_C1-33770
04131 Membrane trafficking [BR:
sjp04131
]
SJA_C1-33770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjp04147
]
SJA_C1-33770
Messenger RNA biogenesis [BR:
sjp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SJA_C1-33770
Ribosome biogenesis [BR:
sjp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SJA_C1-33770
Membrane trafficking [BR:
sjp04131
]
SNARE
SNARE associated proteins
Others
SJA_C1-33770
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SJA_C1-33770
Exosome [BR:
sjp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SJA_C1-33770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
NACHT
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_18
Mg_chelatase
AAA_30
AAA_7
AAA_24
ABC_tran
AAA_11
Sigma54_activat
AAA_19
AAA_17
DUF815
TsaE
AAA_3
Zeta_toxin
ATPase
Parvo_NS1
NB-ARC
SLFN-g3_helicase
PhoH
AAA_lid_PRS2_C
bpMoxR
Sigma54_activ_2
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAI98211
UniProt:
D4Z6H9
LinkDB
All DBs
Position
1:3361597..3363852
Genome browser
AA seq
751 aa
AA seq
DB search
MANARPEDAGRGLARLPLAVMAELHLAEGDVVEIAGKRSTPARVVRPYKEDEGLDVLRLD
GLQRANAGVGSGDFVVIRKVDPRPAQRVVFAPAQNNLRLQGNPEALKRVFFQRPLASGDV
VATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTVPKGVVHIDAETEVELRAEYE
EPRESRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPKGVLLHGPPGTGK
TRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAAAKAAPSILFIDEIDSIAP
KRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRRPGRFDREIIVGV
PDERGRREILGIHTRGMPLADGVDLGELARMTYGFVGADLAALTREAAIETVRRFMPRLN
LEEGTIPPDVLEELSVARDDFMAAIKRVQPSAMREVMVQAPNIGWADIGGLDEAQMRLKE
GVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKW
YGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERVVNTILAEMDGLE
ELQSVVVIGATNRPTLIDPALLRPGRFDELIYVPVPDQAGRRRILSIHTGKMPLADDVDL
DLLAERTERFTGADLEDMVRRAGLVALRQSLSVDKVSQAHFDAALEDTRASVTPEMEREY
EQIQATLKQSVMQIDPIGFVSPGMLRGRARD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtggccaacgcccggccggaggatgcggggcgcggccttgcccggctgccgctggcggtg
atggcggaactccaccttgccgaaggggatgtggtggagatcgcgggcaagcggtccacc
cccgcgcgcgtggtccggccctacaaggaggatgaggggctggacgtccttcgcctcgac
gggcttcagcgggccaatgcgggcgtcggatcgggcgacttcgtggtcatccggaaggtc
gatccccgccccgcccagcgcgtcgtcttcgcgcctgcacaaaacaatctgcggttgcag
ggcaatcccgaagcgttgaagcgggttttcttccagcggccgctggcgtccggcgatgtc
gtcgcgaccgcgggacagcagcaggtgccccccggcgacatgccgccccagttgcgccag
atgctggccgcgcccgcctatgccctgcaggagattcgcctggtcgtggtgtcgacggtg
ccgaagggcgtcgtccatatcgacgcggagaccgaggtcgaactgcgcgccgaatatgag
gagccccgcgaatcccgacgggccgacgtcacctatgacgatgtcggcggcatggccgag
gccatcgaccagttgcgcgagatggtggaactgccgctgcgctatcccgaactgttcgag
cggctgggcgtcgatccgcccaagggggtgctgctccacggcccgcccggcaccggcaag
acccggctggcccgcgccgtcgccaatgaatcggaggccgaattcttcctgatcaacggt
ccggagatcatggggtcggcctatggcgaatcggaaaagcagcttcgcgagattttcgag
gcggcggccaaggcggccccgtcgatcctgttcatcgacgagatcgattccatcgcgccc
aagcgcggcaatgtgactggcgagacggaaaagcggttggtcgcgcaattgctgacgctg
atggacgggctggagccgcgcaccaacctggtcgtcatcgccgccaccaaccggccggag
gcgattgacgaggcgctgcgccgtcccggccgtttcgaccgggagatcatcgtcggcgtg
cccgacgagcgcgggcggcgggagatattgggcatccacacccgcggcatgccgctggcc
gacggcgtcgacctgggcgaactggcgcgcatgacctacggctttgtcggtgcggatctg
gcggcgctgacccgcgaggccgcgatcgaaaccgtgcgccgcttcatgccccggctcaac
ctggaggagggaacgatcccgcccgacgtgctggaggaactgtccgtagcgcgcgacgat
ttcatggccgcgatcaagcgcgtccagccctccgccatgcgcgaggtgatggtccaggcg
ccgaacatcggctgggccgacataggcgggctggacgaagcgcagatgcggttgaaggaa
ggggtggaactgccgctgaaagaccctgacgccttccgccgcatcggcatccgcccggcc
aagggcttcctgctatacggcccgcccggcaccggcaagacgctgctggcgaaggccgtg
gcgcgggaagcgcaggccaatttcatcgccaccaaatcgtccgacctgctcagcaaatgg
tatggggagagcgaacagcagatcgcccgcctcttcgcccgcgccaggcaggtcgctccg
accgtcatcttcatcgacgaactggacagcctggtcccggcgcggggcgggggcctgggc
gaaccgcaggtgacggagcgggtggtgaacaccatattggccgagatggacgggctggag
gaattgcagtccgtggtcgtcatcggcgcgaccaaccggccgaccctgatcgatccggcg
ctgttgcggccgggccggttcgacgagctgatctatgtccccgtgccggatcaggcgggg
cgcaggcggatattgtccatccataccggcaagatgccgctggctgacgatgtcgatctg
gacctgctggccgagcggaccgagcgcttcaccggcgccgacctggaggatatggtccgc
cgcgcaggtctggtcgcgctgcgccagtcgctgtcggtcgacaaggtcagccaggcgcat
ttcgacgcggcgctggaggacacccgcgcctccgtcacgccggagatggagcgcgaatat
gagcagatacaggcgacgctgaagcagagcgtgatgcagatcgatccgatcggcttcgtg
tcgcccggcatgctgcgggggcgcgccagggattga
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