Sphingobium indicum UT26S: SJA_C1-33940
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Entry
SJA_C1-33940 CDS
T01201
Name
(GenBank) putative selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00450
Selenocompound metabolism
sjp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SJA_C1-33940
Enzymes [BR:
sjp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SJA_C1-33940
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SJA_C1-33940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAI98228
UniProt:
D4Z6J6
LinkDB
All DBs
Position
1:complement(3377440..3378723)
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AA seq
427 aa
AA seq
DB search
MTEPAPPPFGLSLSKPSAERSEAPSLSPNGFLDLRHDFPGVGDWHYLDSAATAQKPNAVI
EAIARAYGPDYATVHRGVYERSANMTLAYEAARRKVAQFIGAASDSEIVYVRGATEGINL
VAQCWAGTQIKTGDRILLSMLEHHSNIVPWQIAAEKVGAAIDVVPLTPDGRIDLDAMQAM
ITPAHKMVALAHVSNVLGSVLDVRRAADIAHSVGAKILIDGCQAVPRLAVDVQALDCDFY
VFSAHKLYGPTGIGALWGRKELLDAMPPYQGGGSMIDKVTFEKTTYAPPPTRFEAGTPHI
TGVVGLSAAIDYVQAIGLDAIHAHECALVGKARAALESLNSVRVFGPEDSAGILSFEVEG
VHPHDVGTILDETGVAIRAGHHCAQPLMRHLGVEATARASFGIYSDESDVDALVKGIERV
RKIFAND
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacccgctccccccccgttcgggctgagcctgtcgaagccctccgctgagcgc
agcgaagcgccttcgctcagcccgaacggatttctggacctccgccacgatttccccggc
gtcggcgactggcactatctcgacagcgccgccaccgcgcagaagcccaacgccgtgatc
gaggccatcgcccgcgcctatggcccggactatgcgacggtccatcgtggcgtctatgag
cgctccgccaacatgacgctcgcctatgaagccgcccgccgcaaggtcgcgcagttcatc
ggcgcggcttccgacagcgagatcgtctatgtccgcggcgcgacggagggcatcaacctc
gtcgcgcaatgctgggcgggcacgcagatcaagaccggcgaccgcatcctgctctccatg
ctggagcatcacagcaacatcgtcccctggcagatcgcggcggagaaggtcggcgccgcc
atcgacgtcgtgccgctcaccccggacggcaggatcgatctcgacgccatgcaggcgatg
atcacccccgcgcacaagatggtggcgctggcccatgtgtcgaacgttctgggcagcgtg
ctcgacgttcgccgcgccgccgacatcgcccacagcgtcggcgcgaaaatcctgatcgat
ggctgccaggcagtgccgcgcctcgccgtcgacgtgcaggcgctggattgcgatttctac
gtcttttccgcgcacaagctctacggcccgaccggcatcggcgcgctctgggggcggaag
gaattgctggacgccatgcccccctatcagggcggcggatcgatgatcgacaaggtgacg
ttcgaaaaaaccacctacgcccccccgccgacccggttcgaggcgggaacgccgcacatc
accggcgtcgtcggcctgtcggcggcgatcgactatgtgcaggccatcgggctggacgcg
atccacgcccatgaatgcgcgctggtcggcaaagcgcgggcagcgctggaaagcctcaac
agcgtccgcgtcttcgggcctgaggattcggcgggcatcctctctttcgaggtggagggg
gttcatccgcacgatgtcggcaccatattggacgaaacgggcgttgccataagggcaggg
catcattgcgcgcagccgctgatgcgccatctgggcgtcgaggcgaccgcgcgggccagc
ttcggcatctacagcgacgaaagcgatgtggatgcgctggtcaaaggtattgaaagagtg
aggaagatcttcgccaatgactga
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