Sphingobium indicum UT26S: SJA_C1-34140
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Entry
SJA_C1-34140 CDS
T01201
Symbol
pspF
Name
(GenBank) psp operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjp03000
]
SJA_C1-34140 (pspF)
Transcription factors [BR:
sjp03000
]
Prokaryotic type
Other transcription factors
Others
SJA_C1-34140 (pspF)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
AAA
AAA_16
AAA_22
MCM
Motif
Other DBs
NCBI-ProteinID:
BAI98248
UniProt:
D4Z6L6
LinkDB
All DBs
Position
1:3391113..3392129
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AA seq
338 aa
AA seq
DB search
MEKNTQFVGQSLAFLDAVEQAGRAAELNRPVLVIGERGTGKELIAERLHRLSPRWGEPLI
VMNCAALPETLIEAELFGHEQGAFTGAARARAGRFEEADGGTLFLDELGTLSMAAQERLL
RVIEYGEVTRIGASKPMTVDVRIVAATNEDLPAAADAGRFRPDLLDRLSFEVITLPPLRA
REGDVAVLADHFGRRMAAEIGWPQWPGFSAACMAELEAHEWPGNVRELRNVVERAVYRWN
EPGRPVAAIMFDPFASPWKPRPMTVAKVEAVPAPSSVAAANGHEAVTDLKSAVDAHEAAI
VRAALERFRYNQRATAKGLGLSYDQLRHCMKKHGLSAG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatacccagttcgtcggccagtcgctggcctttctggatgcggtcgagcag
gccgggcgcgccgccgaactcaaccggccggtgctggtgatcggggagcgcgggacgggc
aaggaactgatcgccgagcgccttcatcgcctgtcgccgcgctggggcgaaccgctgatc
gtcatgaactgcgccgccttgcccgaaacgctgatcgaggcggaactgttcggccatgag
cagggcgccttcaccggcgcggcgcgggcgcgggcgggacggttcgaggaggcggacggc
ggcacattgttcctggacgaactgggcacgctgtccatggcggcgcaggagcggttgctg
cgcgtgatcgaatatggggaggtgacgcggatcggcgcgtccaaacccatgaccgtcgac
gtgcgcatcgtcgcggcgaccaacgaagacctgcccgccgccgccgatgccgggcggttc
cggcccgacctgctggaccggctgagtttcgaggtcatcaccctgccgccgctgcgggcg
cgggagggggatgtggcggtgctggcggatcatttcgggcggcgcatggcggccgagatc
ggctggccgcaatggccgggcttttccgccgcctgcatggccgagctggaggcgcatgag
tggcccggcaatgtgcgcgaactgcgcaatgtggtggagcgggcggtctatcgctggaac
gagccggggcggccggtcgcggcgatcatgttcgatcccttcgcctcgccgtggaagccc
aggcccatgacggttgcgaaggtcgaggcggttcctgcgccgtcatcggtggcggcggcg
aacgggcatgaggcggtcacggacctgaaatcggcggtcgacgcgcatgaggcggcgatc
gtgcgggcggcgctggagcggtttcgctacaaccagcgggcgacggcgaagggcttgggg
ctgagctatgaccagcttcgccattgcatgaagaagcatgggttgagcgcggggtag
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