Sphingobium indicum UT26S: SJA_C1-34860
Help
Entry
SJA_C1-34860 CDS
T01201
Name
(GenBank) putative Ca2+-binding hemolysin
Organism
sjp
Sphingobium indicum UT26S
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
BAI98320
UniProt:
D4Z6T8
LinkDB
All DBs
Position
1:complement(3463504..3467241)
Genome browser
AA seq
1245 aa
AA seq
DB search
MANFFNVVGSQTITAGSEKDQFFAFTRLANLDTVRPDAVLAQLVWNSAILTGSGAAYQLA
ASNIQISMDLLMGGTGTDVIYGSNLSDAIFYNNGVISGGFGSFDNIEQFWLGDGDDIIDL
TAHGAGGIDYAKDVLVQAGLGNDIVIGGAGKDNLQGDGGNDIIFGWRGSDTIAGGAGDDL
LYGDDLGFNNISGDDTIDGGTGNDILYGGRGSDRMTGGDDDDILYGQAGGDNMSGGSGND
ILHGDDADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDDLLDGGSGNDYMHGGAGNDTI
LAGAGNDVIDGSADVDTLVFSGNRMDYVFTLQADGSYVAVDQRAGSPEGSKTIRNVEYFQ
FADMTTPSTALNAPPVITSNGGGSSASLTVDENVTAVTIVTATDPDMGQAVAFSIVGGAD
AALFAIDALTGELRFLAAPNFESPADADRDNVYQLIVAANDGNGGVDTQALSVTVNDVPD
GSAPVITSNGGGASAAIAIDENGTAVTSVTATDADSPSIGFAIIGGADAALFEIDAVTGA
LRFKAAPDHEAPADADHDNVYDVIVQASDGANADQQMLAVTVANLNDNAPVLTSYAGAAS
VALSVAENSLLAATVQASDADGAALSYSIGGGADAALFTIDPATGALSFKTAPDFEAPDD
SNGDRLYHVIVSASDGSTSVSQTLAISVANVNDNAPIITSNGGGASASISMAENAGAVTV
VTASDADGTAPGFAISGGADAALFTIDPVTGALSFINAPDFENRLDADGDGVYQVTVRAT
DGSNADDQLLSITVTDVAENGKTITGSSGNNTISPTTAVLAYQTTALNDTIYALAGNDVI
DGGAGADYMDGGAGNDSFYVDTWSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEK
LTLTGAAAINGMGNELTNTITGNDAANMLSGGLGADILYGMGGADALDGGDDNDTLFGGD
GDDMLVGGLGDDYLDGGAGADSMTGGLGNDSYIVDSWSDDGNSANDDLIVELAGEGTDQV
SASVSYKMAAEIEKLVLTGTDSIDGIGNDIANTMTGNSGNNGLWGGLGNDTLLGNGGDDR
LYGEDGQDSLDGGAGNDLLDGGAAGDTLKGGAGSDMLIGGAGKDTLTGGAEADVFIFNRG
DTTLNTASYDRITDFKAIEGDRIDLDFLNGSLPAADYAERTIATNNFADALAAANTTAGV
NHVAFVAGTTDGWIFYDANGDGAFDQSVQLVGVNSLAGADSTSFF
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttctttaacgtggtgggaagccagaccatcacggcaggtagtgagaaggac
cagttcttcgccttcacccggcttgccaatctcgacacggtgcgccccgacgcggtgctg
gcgcaactggtctggaactccgcgatcctgaccggcagcggcgcggcctatcaactggcc
gccagcaacatccagatttccatggacctgctgatgggcggcaccggcacggacgtcatc
tatgggtccaacctgtccgacgcgatcttctacaataatggcgtgatttccggcggcttc
ggcagcttcgacaatatcgagcagttctggctgggcgacggggacgacatcatcgacctg
acggcgcatggcgcgggcgggatagactatgccaaggacgtgctggtccaggcgggcctt
ggcaacgacatcgtcatcggcggcgcgggcaaggacaatcttcagggcgacggcggcaac
gacatcatcttcggctggcgcggcagcgacacgatagccggcggcgcgggggacgacctg
ctctacggcgacgatctgggcttcaacaacatctctggcgacgataccatcgacggcggc
acgggcaacgacatcctctatggcggccgcggcagcgacaggatgaccggcggcgacgat
gacgacatcctctacggccaggccggcggcgacaacatgtcgggcgggtcgggcaatgac
atcctccatggcgacgatgccgacaccaacagcaacgacacgctgaacggcgacgcgggc
aatgaccagctttatggcggcgcgggcagcgacgaactctatggcggcaccggcgacgac
ctgttggatggcggcagcggcaacgattacatgcatggcggcgcgggcaacgacacgatc
ctcgcgggcgcgggcaacgacgtgatagacggcagcgcggacgtcgacacgctggtcttt
tcgggcaaccggatggactatgtcttcacgctccaggccgatggcagctatgtcgcggtc
gaccagcgcgccggctctccggagggtagcaagaccatccgcaacgtcgaatatttccag
ttcgcggacatgacgaccccttccaccgcgctgaatgcgccgccggtcatcacgtccaac
ggcggcggctccagcgcgtccctgaccgtcgatgagaacgtcaccgccgtcaccatcgtc
accgcgaccgatcccgacatggggcaggcggtcgccttttccatcgtcggcggcgcagac
gccgcgctgttcgcgattgacgcgctgacgggcgaactgcgcttcctcgccgcgcccaat
ttcgaaagcccggccgatgccgaccgcgacaatgtctaccaactgatcgtcgccgccaat
gacggcaatggcggcgtggacacgcaggcgctttccgtgaccgtgaacgacgtgccggac
ggctccgcgccggtcatcacctccaatggcggcggcgccagcgcggcgatcgccattgac
gagaatgggacggctgtgaccagcgtcaccgccaccgatgccgacagcccgtcgatcggc
ttcgccatcatcggcggagcggatgcggcgctctttgagatcgatgcggtgacgggcgcg
ctccgcttcaaggccgcgccggaccacgaagcccccgccgacgccgatcatgacaatgtc
tatgacgtgatcgtgcaggccagcgacggcgccaatgcggaccagcagatgctggcggtg
accgtcgccaatctcaacgataacgcgccggtgctgacttcctatgccggggcggcttcc
gtcgccctttccgtcgccgaaaacagcctgctcgccgcgacggtccaggccagcgatgcc
gacggcgcggcgctcagctacagcatcggcgggggcgccgacgcggcgctgttcaccata
gatccggcgacgggtgcgctgagcttcaagacggcgcccgatttcgaagcgcccgacgac
agcaatggcgaccgcctctaccatgtcatcgtcagcgccagcgacggcagcaccagcgtc
tcgcagaccctggccatcagcgtcgccaatgtgaacgacaacgcgccgatcatcacctcc
aacggcggcggcgcttcggcgtcgatcagcatggcggagaatgcgggcgccgtgaccgtc
gtcaccgccagcgacgcggacgggaccgcgcccggcttcgccatttccgggggagccgac
gccgcgctgttcaccatagatccggtgacgggcgccctttccttcatcaacgccccggat
ttcgagaaccggctcgatgccgatggcgacggcgtctaccaggtgacggtgcgcgcgacc
gacggcagcaacgccgatgaccagcttctgtcgatcaccgtcaccgacgtcgcggaaaac
gggaagacgatcacgggatcttcgggcaacaacacgatcagccccacgaccgccgtgctc
gcctatcagaccacggcgctcaacgacaccatctacgcccttgccggcaatgacgtcatc
gatggcggagcgggcgcggactatatggacggcggcgcgggcaacgacagcttctatgtc
gacacatggtcggacgacggctttgccggcaatgacgaccaggtgatcgaactggcgggc
ggcggcagcgaccttgtctatgcttccgtcagctaccgcctcgccgccaatgtcgagaag
ctgacgctgaccggcgcggcggcgatcaacggcatgggcaatgaactgaccaacaccatc
accggcaatgatgcggccaatatgctgtcgggcggcctgggcgccgacatcctctacggc
atgggcggcgccgacgcgctggacggcggcgacgataacgacaccctcttcggcggcgac
ggcgacgacatgctggtcggtgggctgggcgacgattatctggacggcggcgcgggcgcc
gacagcatgaccgggggcctgggcaatgacagctatatcgtcgacagttggtccgatgac
ggcaacagcgccaatgacgacctgatcgtcgagctggcgggcgaggggaccgatcaggtg
agcgcctccgtcagctacaaaatggcggccgagatcgagaagctggttctgaccggcacg
gactcgatcgacggcatcggcaacgacatcgccaacacgatgaccggcaacagcggcaat
aacggcctgtggggcgggctgggcaacgacaccctgctgggcaatggcggcgacgaccgg
ctctatggcgaggacgggcaggacagcctggacggcggcgctggcaatgacctgctggac
ggcggcgcggcgggcgacacgctgaagggcggggcgggcagcgacatgctgatcggcggc
gcgggcaaggatacgctgaccggcggcgcggaggcggacgtcttcatcttcaaccgcggc
gacacgacgctcaacacggcaagctatgaccgcatcaccgatttcaaggcgatcgagggc
gaccgcatcgacctcgacttcctgaacggctccctgcccgctgccgactatgccgaacgg
acgatcgccaccaacaatttcgccgacgcgctggcggcggccaacaccaccgcgggcgtc
aatcatgtggcgttcgtcgccggcacgaccgacggctggatcttctacgacgccaatggc
gacggcgctttcgaccaaagcgttcagctggtgggcgtcaacagcctggccggggcggat
tcgaccagtttcttctag
DBGET
integrated database retrieval system
