Sphingobium indicum UT26S: SJA_C1-35010
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Entry
SJA_C1-35010 CDS
T01201
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SJA_C1-35010 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-35010 (mutS)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SJA_C1-35010 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
BAI98335
UniProt:
D4Z6V3
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Position
1:3483960..3486611
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AA seq
883 aa
AA seq
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MARTIDTSTQQATPMMAQYLALKAEAQDCLLFYRMGDFFELFFEDAKAAAATLDIALTSR
GEHGGAPIPMCGVPVHSAESYLARLIKAGHRVAIAEQTETPAEAKARGSKSLVARAIVRY
VTAGTLTEETLLDSRRDNMLAALAQVGGEEADEYGLAAADISTGRFETLTLRAADLPAEL
ARLRPSEIVLPDGLDLELPDSHPFDRAAFSSSRAEAALKRIFGVATLDGFGQFSRAELAA
MGGLLGYLDHAGKGTLPFLAPPVRKTSGAHVAIDAATRESLEITATMSGTRAGSLLGAVD
RTVTGAGARLLAQDLSAPLMDQPAIEARLGLVQLFHDDAMLRDQLRVTLRALPDIGRALG
RLAMGRGSPRDLGQLRDGLGEARLLRERLGRLPDQPLLLAQLLPSLDGHGALVDSLSRAL
VPSPPTETANGGYIADGYDAALDELRRLAGDGRRAIAALEAKYREQTGIASLKIRHNGVL
GYHVEVPARAADQLMQPDSGFTHRQTLAGVVRFNSVDLHEQASRVAQAGAHALVAEAAHL
EELIESTLARKAEIARAADALARLDVAAALAERAAEGGWQRPHFLPEDGEGPCLEITGGR
HPVVEDALRRDGQPFVANDCRLGASDRLWLVTGPNMGGKSTFLRQNAIIVILAQAGAYVP
AQSATLTLVDRLFSRVGASDNLAKGRSTFMVEMVETAAILAQATERSFVILDEVGRGTST
YDGLALAWAVVEAVHEVNRCRCLFATHYHELTRLAETLSSLSLHHVRAREWKGDLVLLHE
VAEGPADRSYGLAVARLAGLPPAVLKRAKDVLSRLEAGKAKTGGIAAGLDDLPLFAAAVA
QVEEKADPLRAALDGIDADALSPREALDQLYRLKQLAAAGRDG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaacgatcgatacatccacgcagcaggcgacgcccatgatggcgcaatatctc
gcgctgaaggcggaggcgcaggactgcctgctcttctaccgcatgggcgatttcttcgaa
ctgttcttcgaggatgcgaaggcggcggcggcgacgctggacatcgcgctcaccagccgg
ggcgagcatggcggcgcgccgatcccgatgtgcggcgtgccggtgcacagcgcggaatcc
tatctggcgcggctgatcaaggcgggccatcgcgtcgccatcgccgagcagaccgaaacc
ccggccgaggccaaggcgcgcgggtccaagtccctcgtcgcccgcgccatcgtccgttac
gtgacggcgggcacgctgaccgaggaaacgctgctcgacagccggcgcgacaatatgctg
gcggcgctggcgcaggtcggcggcgaagaggcggacgaatatgggctggccgccgcagac
atttcgaccggccgtttcgaaacgctgacgctgcgggcggccgatctgcccgccgaactg
gcgcgcctgcggccaagcgagatcgtgctgccggacgggctggacctggaactacccgat
tcccacccgttcgaccgcgccgccttttccagcagccgggccgaagcggcgctgaaacgc
atcttcggcgtggccacgctggacggattcggccagttcagccgcgccgaactggcggcc
atggggggactgctcggctatctcgaccatgcgggcaagggcaccctgcccttcctggcc
ccgcctgttcgcaagaccagcggcgcgcatgtcgccatcgacgccgcgacccgcgagagc
ctggaaatcaccgccaccatgagcgggacgcgggcgggcagcctgctgggcgcggtggac
cggaccgtcaccggcgcgggcgcccgattgctggcgcaggatctgtcggcgccattgatg
gatcagcccgcgatcgaggcgcggctgggactggtgcaactcttccatgacgacgccatg
ttgcgcgaccagttgcgcgtgacgctgcgggccttgccggacatagggcgcgccctgggg
cgtctggcgatgggccggggcagtccccgcgatctgggtcaactccgcgacgggctgggc
gaagcgcggctgttgcgggagcggctgggccgcctgcccgaccagcccctgctgctggcg
cagcttctcccctcgctcgacggccatggcgcgctggtcgacagcctgtcccgcgccctc
gtccccagcccgcccaccgaaacggccaatggcggctatatcgccgacggctatgacgcg
gcgctggacgaattgcgtcgcctcgccggggacggccgccgcgccatcgccgcgctggag
gcgaaatatcgcgagcagaccggcatcgcctcgctcaagatccggcataatggcgtgctc
ggctatcatgtcgaggtgcccgcccgcgccgccgaccagttgatgcagcccgacagcggc
ttcacccatcgccagacgctggcgggcgtggtgcgcttcaattcggtggacctgcacgaa
caggcgagccgcgtcgcgcaggcgggcgcccacgcattggtcgccgaagccgcgcatctg
gaagagctcatagaatccaccctcgcccgcaaggcggagatcgcccgcgccgccgacgcc
ctcgcccggctcgacgtggcggcggcgctggccgaacgggcggcggagggcggttggcag
cggccccatttcctgcccgaagacggcgaagggccatgtctggaaatcaccggcggccgc
catccggtggtggaggacgcgctgcgccgcgacggccagcccttcgtcgccaacgactgc
cggcttggggcaagcgaccggctctggctggtcacaggcccgaacatgggcggcaagtcc
accttcctgcggcagaatgcgatcatcgtcatcctcgcgcaggcgggcgcctatgtgccc
gcccagtccgccaccctgactctggtcgaccgcctcttcagccgcgtcggcgcgtcggac
aatctggccaagggccgctccaccttcatggtcgagatggtcgagaccgccgccatattg
gcgcaagcgaccgagcgcagcttcgtcatcctggatgaagtcgggcgcggcacgtcgacc
tatgacgggctggcgttggcatgggcggtggtggaggcggtgcatgaggtcaaccgctgc
cgctgcctgttcgcgacccattatcatgagctgacccggctggcggagacgctatcctcc
ctttccctccaccatgtccgggcgcgggaatggaagggcgatctggtcctgctgcacgaa
gtcgcggaagggcctgcggaccgcagctacggcctcgccgtggcgcggctggccgggctg
ccccccgccgtgctcaagcgcgccaaggatgtcctctcccgcctggaagcgggcaaggcg
aagaccggcggcatcgcggcggggctggacgacctgcccctcttcgccgccgccgtcgcg
caggtggaggaaaaggccgatccgctccgagccgcgctggacggcatagacgcagacgcg
ctttccccccgcgaggcgctcgatcaactctatcggctcaagcaactggcagcagccggt
cgggatggctag
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