Sphingobium indicum UT26S: SJA_C2-03300
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Entry
SJA_C2-03300 CDS
T01201
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis CobD/CbiB
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00860
Porphyrin metabolism
sjp01100
Metabolic pathways
sjp01240
Biosynthesis of cofactors
Module
sjp_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SJA_C2-03300 (cobD)
Enzymes [BR:
sjp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
SJA_C2-03300 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
AmpE
VEGFR-2_TMD
Motif
Other DBs
NCBI-ProteinID:
BAI98693
UniProt:
D4Z874
LinkDB
All DBs
Position
2:complement(407552..408487)
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AA seq
311 aa
AA seq
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MGEPAALAALMLDAALGWPGWLHAQIGHPVGGFARIIGAAERRWNREAWSGRVRRWTGLA
LLLLLLGVGGGAGLALEWAIRRWGGGTAWPWLALAAWPALAQNSLYVHVAPVVRALAKGE
MDAARQAVARIVGRDTAALDEAGVARAGIESLAESFCDGVVAPLFWLLLLGPPGIWAYKA
VNTADSMIGHKEAPYTDFGWAAARFDDLLNWVPARLSGLILCVAGGGGWAVLRRDRRKHA
SPNAGWPEAAMAGALGIRLAGPIRYDGVLHDKPWIGTGGEADVRAMKAALRIYVLACLLL
WGLAAIWEGVG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagccggcggccctggcggcgctgatgctggatgcggcgcttggctggccgggt
tggctgcacgcccagatcggccatccggtcggcggtttcgcccggatcatcggcgcggcg
gaacggcgatggaaccgggaggcgtggagcggccgggtgcgtcgatggacgggactcgcc
ctgctgttgctgttgctgggcgtgggcgggggcgctggtctggcgctggaatgggcgatc
cgccgctggggcgggggcacggcctggccatggctggcgctcgccgcctggccggcgctg
gcgcagaacagcctctatgtccatgtcgcgccggtggttcgcgcattggcgaagggggaa
atggatgcggcgcggcaggcggtggcccgaatcgtcggccgcgacacggccgcgctggat
gaagcgggcgttgcgcgggccggcatagaaagtctggccgaaagcttctgcgacggcgtc
gtcgcaccgctgttctggctgctgctgctcggcccgccgggcatatgggcctataaggcg
gtcaacaccgccgacagcatgatcgggcacaaggaggcgccctacaccgatttcggttgg
gcggcggcgcgcttcgacgatctcttgaactgggtgccggcgcggctctccggcctgatc
ctgtgcgtcgccgggggtggcggatgggccgtgctgcggcgggatcgccggaagcatgcc
tcgcccaatgcgggatggccggaggccgcgatggccggcgcgctcggcatccggctggcg
gggccgatccgctatgacggcgtgctgcacgacaagccatggatcgggacgggcggggaa
gcggacgtccgcgcgatgaaggcggcgctgcgcatctatgtgctcgcctgcctgctgctg
tggggcctcgccgcaatctgggagggcgtcggatga
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