Sphingobium indicum UT26S: SJA_C2-05060
Help
Entry
SJA_C2-05060 CDS
T01201
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00250
Alanine, aspartate and glutamate metabolism
sjp00310
Lysine degradation
sjp00350
Tyrosine metabolism
sjp00650
Butanoate metabolism
sjp00760
Nicotinate and nicotinamide metabolism
sjp01100
Metabolic pathways
sjp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SJA_C2-05060 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SJA_C2-05060 (gabD)
00310 Lysine degradation
SJA_C2-05060 (gabD)
00350 Tyrosine metabolism
SJA_C2-05060 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SJA_C2-05060 (gabD)
Enzymes [BR:
sjp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SJA_C2-05060 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SJA_C2-05060 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SJA_C2-05060 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF6197
Motif
Other DBs
NCBI-ProteinID:
BAI98869
UniProt:
D4Z711
LinkDB
All DBs
Position
2:complement(586321..587820)
Genome browser
AA seq
499 aa
AA seq
DB search
MTAATMQQQALAEAADMVSSVPTGLFIDGAWRAAADGQQFSVHDPATGDVVARLANATPS
DAMDALDAADRAFPSWSRTPPRERAELLRRTFDLVMRDRERIARIITLEMGKPLRESHAE
VSYGAEFLRWFGEEAVRISGRFGSSPEGTGDMIVSRHALGPALLITPWNFPLAMATRKIA
PALAAGCTVVIKPAALTPLTTLYLVKLLEEAGLPAGVVNVIPTTNSGGATGPIIADSRLR
KISFTGSTQVGRVLLEKASANILRSSMELGGNAPFLVFDDADLSRAVEGALVAKFRNIGQ
ACTAANRFIVHASVAQEFSRRVAEKVAQFKLGSGFDPDVAIGPLIDEAAVAGVDELVQDA
LSRGATLVTGGKRRGGAGTFFEPTVLTDVARDSRLLREEIFGPVLPIVTFDTDDEAIAIA
NDTEYGLVGYAFTASIERGQRLINELQTGMMGWNVGVLSNAAAPFGGVKMSGLGREGGAE
GIDEYLTTKYTLLPSVFRP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcgaccatgcagcagcaggctctggcggaggcggccgacatggtttcgtcc
gtccccacgggacttttcatcgacggcgcctggcgcgcggcggccgacgggcagcaattt
agcgtccacgatccggcgaccggggatgtcgtcgcccggctggcgaatgcgacgccgtcg
gacgccatggatgcgctcgacgccgccgaccgcgccttcccgtcatggtcgcgcacgccg
ccgcgcgagcgcgccgagttgctgcgccggacgttcgacctcgtcatgcgcgacagggag
cggatcgcccgcatcatcacgctcgaaatgggaaagccgctgcgggaatcccatgccgag
gtgagctatggcgcggaattcctccgctggttcggcgaggaggcggttcgcatatccgga
cgcttcggctcgtcgccggagggcaccggggacatgatcgtctcgcgccatgcgcttggc
ccggcgctgctcatcacgccctggaactttcccctcgccatggcgacgcgcaagatcgcg
cccgcgctggccgccggatgcaccgtcgtgatcaagcccgccgcgctgacgccgctcacc
accctgtatctcgtgaaattgcttgaagaggcgggcctgccggcgggcgtcgtcaacgtc
attcccacgacgaattcgggcggcgccaccggaccgatcatcgccgacagccgcttgcgc
aagatcagcttcaccgggtcgacgcaagtggggcgggtgctgctggagaaggcctccgcc
aacatcctgcgatcctccatggaactgggcggaaacgcgcccttcctggtcttcgacgat
gccgatctctcccgcgccgtggaaggcgcgctcgtcgcgaagttcaggaatatcggccag
gcctgcacggcggccaacaggttcatcgttcatgcaagcgtggcccaggaattcagccgg
cgggtggcggagaaggtggcgcagttcaagctcggctcaggcttcgatccggacgtcgcg
atcggccctctgatcgacgaggcggcggtcgcgggggtggacgagctggtccaggatgcc
ctgtcccgcggcgcgaccctcgtcacgggcggcaagcggcggggcggcgcgggcaccttc
ttcgaacccacggtgctcaccgatgtcgcaagggacagccgactcctgcgggaggagatt
ttcggccccgtcctgccgatcgtcactttcgacacggacgacgaagccatcgccattgcg
aacgacaccgaatatggcctggtcggctatgccttcaccgccagcatcgagcgggggcag
cggctgatcaatgaactccagaccggcatgatgggatggaatgtcggcgtcctttccaat
gccgccgcaccctttggcggggtgaagatgtcaggcctggggcgcgagggcggcgctgaa
gggatcgatgaatatctgaccaccaaatatacgctgctgccgtccgttttccgcccgtga
DBGET
integrated database retrieval system
