Sporosarcina jeotgali: PGH26_02365
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Entry
PGH26_02365 CDS
T10261
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03420
Nucleotide excision repair
sjt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGH26_02365
03430 Mismatch repair
PGH26_02365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_02365
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_02365
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGH26_02365
MMR (mismatch excision repair)
Other MMR factors
PGH26_02365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
AAA_30
DEAD
AAA_11
SLFN-g3_helicase
ResIII
TPR_GEMI5
NACHT
DUF1800
Motif
Other DBs
NCBI-ProteinID:
WOV84792
LinkDB
All DBs
Position
496489..498714
Genome browser
AA seq
741 aa
AA seq
DB search
MQRHPDFEFEAERLDYTVHYMRRLLEESQRDVDASQEQIRHAMADLDYLDSSMSYINILT
NTRFFEMARSQKETFEAIQKKPYFARIHFQPNDEKDQFLYIGKTSVFHQETQEPIIVDWR
SPVANVYYDGRLGDMTYDVRGEEVSGHLHSKRQYQIEEGELLDVRDIDLTTNDELLQEAL
AGKADVRLTEIISTIQSEQNDIIRASLRKPIIVQGAAGSGKTTIALHRISYFLYTKGTDF
PAEKLMILAPSKLFMDYIGDVLPELGVGSICQTTFEEYVLNATGLKLKLTDTNSKLERLA
SSDSLDEPTIAIARMKGSEAYRTIIARYVKKLEQQTVALFEDVFIENYRIMGTKRLRKLF
LEDFCYLPIEKRLERIKLIMKSEVTRKRKQLYQLLSDKYEAALDKALYGIRDDEKRRARI
TRIMDERDERLPKIEKEGKQKVASYMKRFKKFNVKQLYRSLLTDSGLQTELAPEWSEAFK
VSFREVHVKNTWETEDLAALYDLHVQLKGIESEWKMRVVFIDEAQDYSEYQLAALHDGLE
TELFTLVGDLAQGIHSYRALTSWDLVKKMLPTATYTTLQKSYRTTIEIMNLANQVLAQME
EDLPLVEPVVRHGIEPVFYEMNELDVSRVSEIYETIVGRGHRSVAMICKTNAEAKHLFKV
LSEGGMAVQLLDDQSDIDDSRMLIVPSVLSKGLEFDAVIVAAFDDPFRDSPIDRKLLYVA
MTRPMHELHVLGNAAKEVLGK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacaccctgattttgagtttgaggctgagcgtctggactatacggtgcattac
atgcgacggcttttggaagagtcgcagcgtgatgtcgacgcctctcaagaacaaattcgt
cacgcgatggcggatttggattatttggattccagtatgagctacattaacatcctcacg
aacacacggtttttcgaaatggcgaggtcccagaaagagacgtttgaagctatccagaag
aagccgtattttgcgcgcatccactttcagcctaatgatgaaaaagaccaatttctgtat
atcggcaagacatcggtgtttcatcaggagacgcaagaacctatcattgtcgactggcga
tcgcctgtcgcgaacgtatattacgatgggcgtttaggcgacatgacctacgatgtccgc
ggtgaagaagtgagcggtcatctgcattcaaagcggcaatatcagattgaagagggcgaa
ttgctcgatgtccgggacattgacctcaccacgaatgatgagttgctgcaggaagcgctg
gctggaaaagcggatgtgcgattgacggaaatcatctcgacaatccagtcggaacagaat
gatattatccgcgcgagtttgcgtaagccaatcatcgtacaaggggctgcaggcagtgga
aagacgacgattgcattgcaccgtatttcttattttctttatacaaaaggaacggatttc
cccgctgaaaaattgatgattctcgcacccagtaaattattcatggactatatcggggac
gtgcttcccgagctcggcgtgggcagtatttgccagacgacgtttgaggaatatgtgcta
aatgcgacaggtttgaaactgaaattgaccgatacgaatagcaaattggaaagattagcg
tcatcggattcattggatgaaccgacaattgccattgcgaggatgaaagggtctgaagcg
tatcggaccatcattgcaaggtacgtgaaaaaactggagcagcagacagtcgcacttttt
gaagatgtattcattgaaaactatcgaatcatgggtacgaagcgattgcgcaagctgttc
ttggaagacttttgctacttgccgattgaaaagcggctggagcgaattaaactaatcatg
aaatctgaagtgacgcgcaaacgcaagcaactctatcagcttttatcagataaatatgag
gccgcacttgataaagcgctatacggcattcgtgacgatgaaaaacgccgggctcggatc
acgcgcatcatggacgagcgcgatgagcggcttccgaagattgagaaggaaggcaagcaa
aaggttgcttcctatatgaagagatttaaaaagttcaacgtgaagcaattgtatcggagt
ctgttgacggattccggcttgcaaacagaacttgcgccagagtggtcggaagcgttcaag
gtttcgttccgggaagtccatgtgaaaaacacgtgggaaacagaggatttagctgcgctt
tacgatttgcatgtacagctgaaaggcatcgagagtgaatggaaaatgcgtgttgttttc
attgatgaagcacaggattacagtgaatatcagctggcggcgctgcatgacggacttgag
acggaattgttcacgctggtcggcgatttggcgcaaggaattcatagttatcgggcgctg
acgtcatgggatctggtgaaaaaaatgctgccgaccgctacgtatacgacattgcagaaa
agctatcggactacgattgaaatcatgaatttagcaaatcaagtacttgcacaaatggag
gaagatttgcctctggttgagcccgtcgtccggcatggaatcgaacctgtattttatgag
atgaatgaattggacgtaagccgagtgagtgaaatctatgaaacgattgtgggacgaggt
catcgatctgttgcgatgatttgcaaaacgaatgccgaagcgaagcacctttttaaagtg
ttatccgagggtggcatggctgtccaactgctcgatgaccaaagcgacatcgacgattcc
cgtatgctgattgtgccaagtgttttgtcgaaaggactggagtttgacgctgtcattgtg
gcggcatttgacgatccgtttcgggattcaccaattgaccgcaagttgctgtatgtcgcg
atgacgcggccgatgcatgagttgcatgtgctgggaaatgcagcaaaagaagtattaggc
aaataa
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