Sporosarcina jeotgali: PGH26_03760
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Entry
PGH26_03760 CDS
T10261
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sjt Sporosarcina jeotgali
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_03760 (addB)
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_03760 (addB)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PGH26_03760 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOV85054
LinkDB
All DBs
Position
820225..823725
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AA seq
1166 aa
AA seq
DB search
MTLRFITGRSGTGKTYTIEQEIVQALQADPLGAPIVLIVPDQMSYSLEHSLAAQFGLNGM
VRAQVLTFKRLAWRVLQETGGITRREVDGFGYRMLIRSVLEENREDFKLFRQAADKRGFT
EQVEGVLKEFSRYCLDHTTLAQLHTQLAAASAPRSLVDKAGDLSLLLEKVEERLGSAYVD
SEGHLAMLAGQVQFSSYIQEADIYIDGFELLTNREHEIIRELLKYAKRVTVALPTDEQGE
ATEDHELFFSPMRTKQIITELAREESVEIEAEMKLTTARRFRNPDVLHLEAQFDKYPAAQ
QVSSGDVRVIEATDRRAEMHAVARSIRKLAMSGKRYNDMAILYRQPEVYDELIETIFPQY
DIPVFISQKKPMLHHPLIEFTRSVLEAVTGNWSYEAIFRAVKTDLFFPHGEDRQIWRERA
DRLENYVLAHGIHGHRWFDDVRWRVKKYRGLELHTEVQTDEELAMQAELHSVRDLIRGPL
EGLGKKLKAAQDGRQAAEALFAFMEELHVYDKIIDLRAEEERAGRLLGASEHEQAWTGWI
NILDQFVLMFGDVKMSPKDAVRVLDEGFDTLEFARIPPSLDQVTVMTIDLATFLSIDEVF
VIGTNDGVLPQRIDNEGLISDTDRQWFERVGFELAPSAKSRLMDESYKAYRAFTAASEGL
TVSYPIADEAGKALISSLYIPRLGQVFEGLQTEIAVTDPLDLLEDADELPYISHPRSALP
YAFAQLRHAETEGGVSPIWQAVIAYYEDDPLWSSILSGIQGKRKHGTDTERLTPDLTHGL
YGETMSSSVSRVESYYSCPFQHFATYGLGLRERSEFTLEAPAIGDLFHAALKWVSDEIMR
TGATWAGLTKEDCFRLAREAVDGIAPYFFHRILLSTSRHVYIKRKLTRIIQRTLFALRSQ
ATASSFEPIAVEVGFGPGEQMPPLSIPLKRGGQMNLRGRIDRVDASNVKDKTYIRIVDYK
SSSKALDLTEVYYGLSLQMLTYLDVALEHADEWLHVHADPAGMLYVHVHNPMVRSVQELA
EEAIEEEMLKSFSMKGYVLEDLSVVKEMDSDIERSSKIIPARVKKDGSFYATSKVLAPDD
MQLLRGAVRSRHRQAGDAMLAGDARVYPYRLKERMPCNYCPYQGVCQFDTTDPDAKYRNY
AELSAKESLEKMRKEVEGDAHTTETE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgatttataacgggacggtcagggacagggaagacctatacgatagagcag
gaaattgtacaagcactgcaggcagatccgcttggcgcgccgattgtgctgattgtgccg
gaccagatgtcgtattcgctggagcatagtttggctgcgcaattcggattaaacggcatg
gtgcgtgcgcaagtattgacgttcaagcggctggcatggcgggtgctgcaggaaacaggc
gggattacacgtcgcgaagtggacggattcggatatcggatgcttatccgcagtgtgctg
gaagaaaatcgtgaggatttcaagttattccgacaagcggctgataagcgcggattcacg
gagcaggtagagggtgtgttgaaagagttcagccggtattgtctggatcacacaacactt
gcacagctgcatacccagctcgctgcagcatcagcgccgcgttctttagttgataaagca
ggggatttgtcattgctgctggaaaaagtggaagagcgattagggtcagcatatgtcgat
agtgaagggcatttagcgatgcttgccggtcaggtccagttttcttcctacattcaagaa
gcagacatttacatagacggtttcgaattattgacgaaccgggagcatgaaattatccgt
gagctattaaaatatgcaaaacgggttactgttgcgctgccgacggatgagcagggagaa
gcgacagaggatcacgagttgtttttcagtccgatgcgcacgaaacaaatcattacagaa
cttgcgcgtgaggaatcagtagagattgaagcagagatgaaattgacgaccgcacgccga
ttccgaaatcccgacgtgctgcatctcgaagctcaatttgataaatatccagccgcccag
caagtcagcagcggagatgttcgggttattgaagcaacggatcgccgagctgaaatgcat
gccgtagcccgttcgattcgaaagcttgcgatgtcggggaaacgatacaacgatatggcg
attttgtatcgccagccggaagtctacgatgaattgatcgaaaccattttccctcagtat
gatattccggtcttcatcagccagaaaaagccgatgcttcaccatccgcttattgaattt
acgcgttctgtgctggaagcagtcactggaaactggtcctacgaagcaattttccgtgcg
gtgaaaacggatttgtttttcccccacggagaagaccgtcagatttggcgggaacgtgcc
gatcggctggagaactatgtgctggcacatggaatccatggccaccggtggtttgacgat
gtacgatggcgggtgaaaaagtatcgcggcctggagctgcataccgaagttcagacagat
gaagaactcgcaatgcaggcagagctgcatagtgtccgggatttgatccgcggtcctctg
gaaggtctggggaagaagttgaaagctgcacaagacggcagacaagcggcagaggcgctg
tttgctttcatggaagaactccatgtctatgataaaatcatcgatttgcgtgctgaagag
gagcgtgcagggcgattgctcggtgcgtcagaacatgaacaggcgtggacaggatggatt
aatatcctggatcagtttgtgctcatgtttggagatgtcaagatgtcgccgaaagatgct
gtgagagttctggatgaaggattcgatacgctggagtttgctcggattccgccatctctg
gaccaagtgacggtaatgacgattgaccttgcaacgtttttaagtattgacgaagtgttt
gtcattggaacgaatgacggcgtgctgccgcagcgaattgacaacgaaggactcatatcc
gatacggatcggcaatggtttgaaagggtcggatttgaacttgccccttctgcaaaatcc
cgtttgatggatgaatcctataaagcgtatcgtgcgttcactgcagcttctgaaggattg
accgtgtcgtaccccattgcagatgaagcgggaaaagcattgatttcatcgctttatatc
ccaagacttggtcaagtgttcgaagggttacagacagaaattgcggttaccgatccattg
gatttattggaggatgcggatgaactgccttacatcagtcatccaagatctgcattgcct
tatgcctttgcccaactccgccatgctgaaactgagggaggggtatcgccaatatggcag
gcagtcattgcgtattatgaggacgatccgctttggtcatcgattctttctggcatccag
ggaaaacggaagcacggaacagataccgagcgtttgacaccggatttaacacatggtttg
tacggagaaacgatgtcgtccagcgtatcacgcgtggaatcttattacagctgtccattc
cagcatttcgcgacctatggacttgggctgcgcgagcgctcggaattcacgttggaagca
ccggcgattggagatttgttccacgctgcattgaaatgggtatctgacgaaattatgagg
accggtgccacgtgggcagggttaacgaaagaagattgcttccgtttagcacgagaagct
gtggatggcatcgcgccttatttcttccatcggattttactgtcgacgagccggcatgtc
tatattaaacgcaagttaacccgcattattcagcggacgctgtttgcgcttcgcagtcag
gcaactgcttccagctttgaaccgattgctgtggaagttggattcggaccgggcgagcag
atgccgcctctgtctattcctttaaaacgaggaggccagatgaatttacgcgggcgaatt
gaccgagtcgatgcatcgaatgtcaaggataaaacctatatccgtattgtcgattataag
tcttcttcgaaagctctcgatttgactgaagtgtattacggattgtcgctgcaaatgctg
acgtatctggacgtagcgctcgagcatgctgacgaatggctgcatgttcacgcggatcct
gcggggatgctgtatgtccacgtccataatccgatggtgcgaagcgttcaggagctggcg
gaagaagcgattgaagaagagatgttgaaatcgttttcgatgaaaggctatgtgctggag
gatttatcggtcgtcaaagaaatggacagtgatattgaacgatcgtccaaaataattcct
gcccgtgtgaaaaaagatggttcgttctatgcgacctctaaagtactcgcacctgacgat
atgcaattactgcgcggggcagtccgttcccgccaccgtcaagcgggtgacgcgatgctt
gcaggagatgcacgggtctatccatatcgattgaaagagcggatgccgtgtaactactgt
ccgtaccaaggagtttgtcagttcgacacgacggatccggacgcaaagtaccggaattat
gcagaactttctgcgaaagaatcgcttgaaaaaatgcggaaggaggttgaaggcgatgca
cataccaccgaaaccgagtga
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integrated database retrieval system
