KEGG   Sporosarcina jeotgali: PGH26_04215
Entry
PGH26_04215       CDS       T10261                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sjt  Sporosarcina jeotgali
Pathway
sjt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sjt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PGH26_04215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjt03019]
    PGH26_04215
Messenger RNA biogenesis [BR:sjt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PGH26_04215
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 RMMBL DUF4453 CFAP54_N
Other DBs
NCBI-ProteinID: WOV85142
UniProt: A0ABZ0KZ00
LinkDB
Position
complement(917368..919035)
AA seq 555 aa
MKSIKNNETAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYTYL
KRNADKIKGLFITHGHEDHIGGIPYLLKQVNMPVYGGKLALGLLRNKLEEHGLVRSTKLI
EFGEEDVFKFRKTSVSFFRTTHSIPDAYGVVVKTPSGNIVHTGDFKFDFTPVGEPANLAK
MAKIGSEGVLCLLSDSTNAEVPNFTMSERKVGDSLNEIFRKVDGRIIFATFASNIHRLQQ
VIEAAQIHGRKVAVFGRSMDNAITIGRELGYIDAPKDLFVDAQSINRLPANEVMILCTGS
QGEPMAALSRIANGTHRQVQIQPGDTVIFSSSPIPGNTLSVNKTINALFRAGAEVIHGAL
NNIHTSGHGSQEEQKLMLRLIQPKFFMPIHGEYRMLKMHEELAIACDVEPDNIFIMSNGD
VLALTEDTARLAGRVPSGDIYIDGSGIGDIGNVVLRDRKNLSEDGLVIVVATIDKKRNRV
VSGPDLISRGFVYMRESGAMINEAQYMLTRQMHRKLSTGPADIGVLKSDIIDSLSSYLYD
KTKRRPMILPVILEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatctataaaaaataatgagactgccgttttcgccttaggcggactaggtgaaatc
ggtaagaacacatatgccgttcaatttcaagatgaaatcatcttgattgacgcaggtatt
aaattcccagaagatgatttacttggaattgactacgtcattcctgattacacgtatttg
aaacgcaatgccgataaaatcaaaggactcttcatcacccatggtcacgaagaccatatc
ggaggaatcccttacttattgaaacaagtgaatatgcctgtttacggtggtaaattggcg
cttggattattacgcaacaagcttgaagaacatggtctcgttcgttcaacgaagctcatc
gagtttggtgaagaagatgttttcaagttcagaaaaacatcggtatcattcttccgcaca
acgcacagtattcctgatgcatacggggtcgttgtaaaaactccttcaggcaatatcgta
cacacaggtgatttcaaattcgacttcacccctgtaggagagcctgccaaccttgctaaa
atggcgaagatcggcagcgaaggcgtactatgcctgctctcagatagtacgaatgctgaa
gttccaaactttacaatgtcagaacgtaaagtcggagacagtttgaacgaaatcttcaga
aaagtggacggacgcattattttcgcaacgttcgcttctaatatccatcgattgcagcaa
gtaatcgaggctgcacaaatccacggacgcaaagtcgctgtctttggacggagcatggat
aacgcaattacaatcggccgtgaactgggctacattgacgcgccaaaagatctcttcgta
gatgctcaaagcattaatcgcttgcctgcaaacgaagttatgattttatgtacaggcagt
caaggtgaaccgatggctgcattatccagaattgcaaacgggacacaccgtcaagttcag
attcaaccaggcgatactgtaatcttctcgtcttcaccgattccggggaatacgttaagt
gtaaacaaaacaatcaacgcattgttccgtgcaggtgcagaagtcattcacggcgcactc
aacaatatccatacatctggtcacggttcacaagaagaacaaaaactgatgctccgtcta
attcagccgaaattcttcatgcctatccacggtgaataccggatgttgaagatgcatgaa
gaactagccattgcatgtgacgtagagcccgataatatcttcatcatgtcaaacggtgat
gtccttgccctcactgaagatacggcacgtcttgctggacgagtaccttcaggcgatatc
tatattgacggcagcggaattggggatatcggaaatgtcgttctccgtgatcgtaaaaac
ctttccgaagacggccttgttattgttgtcgcaacaattgataagaaacgcaaccgtgtt
gtatcaggtccggatttgatttcccgcggttttgtttatatgcgtgaatcaggtgcaatg
atcaatgaagcccaatatatgttaacccgtcaaatgcatcgcaaattgtcaacaggacca
gcggatatcggtgtactaaaaagcgacatcatcgattcactcagctcttacctatatgat
aaaacaaaacgcagacctatgattctgcctgtgattttggaagtataa

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