Sporosarcina jeotgali: PGH26_05140
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Entry
PGH26_05140 CDS
T10261
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sjt Sporosarcina jeotgali
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjt03016
]
PGH26_05140 (truB)
Enzymes [BR:
sjt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PGH26_05140 (truB)
Transfer RNA biogenesis [BR:
sjt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PGH26_05140 (truB)
Prokaryotic type
PGH26_05140 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
MIase
DUF7595
Motif
Other DBs
NCBI-ProteinID:
WOV85322
UniProt:
A0ABZ0KZI0
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All DBs
Position
1095281..1096228
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AA seq
315 aa
AA seq
DB search
MDGILPLWKEKGMTSHDCVFKLRKILRTKKVGHTGTLDPSVEGVLPICIGSATKVASYIT
DSGKEYIAEVSIGTATETEDADGDVVKNDASDKVITRVQVLQALDTLTGHITQIPPMYSA
VKVNGRKLYEYARKGIEVERPERKVHIHKIELLSEDEQFEGIEPRFTIKVSCGKGTYIRT
LAVQIGEQLGYPAHMSHLVRTASGTYKQTDCRTLDEVRELQETGSLKSFLRPLESALEGI
VQVQLDDNEELLTKVLNGQVLPLHPILETEDEAVFTEHGRALAVYAPHPEKTGLMKPVKM
FLANREEERTNDGNY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggacggaatcctgcccctatggaaagaaaaagggatgacctcacatgattgtgtattt
aaattacggaaaatccttcgtacgaaaaaagtcgggcacactggaactcttgacccgagt
gtagagggcgtcctgccgatttgcatcgggtctgccacaaaagtcgcatcttacatcaca
gattcaggaaaagaatacattgctgaggtatctattggaactgcgactgaaactgaagat
gctgatggagatgtcgtcaagaatgatgcatcggacaaggtcattactcgtgtacaagta
ctgcaggctctagatactttgactggacatattacacaaattcctcctatgtattcagct
gttaaagtgaacggaagaaaactttatgagtatgcaaggaaaggaatagaagttgagcgt
ccagaacgcaaagtacacatccataaaatcgagttattaagtgaagatgaacaattcgaa
ggaatcgaaccccgctttacgattaaggtatcctgcgggaaagggacatatattcgtacg
cttgcagttcaaattggagaacagcttgggtatcctgcacatatgtcccatttagtaagg
acggcttcaggaacatataagcaaaccgactgccgtacgctagatgaagtccgggagctt
caggaaactggaagcctgaaatcattcttaagaccgctggagtctgctttagagggaatt
gttcaagtacaattagatgacaatgaagaattgctgaccaaagttctaaatggccaagtt
cttcctcttcacccgatactcgaaacagaggacgaagcagtatttacggaacacggcaga
gctctcgctgtgtatgcgccgcatccagaaaaaacagggctgatgaaacctgtcaagatg
tttcttgcgaatcgagaagaggagaggacaaacgatggaaactattga
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