Sporosarcina jeotgali: PGH26_05155
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Entry
PGH26_05155 CDS
T10261
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGH26_05155 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjt03019
]
PGH26_05155 (pnp)
03016 Transfer RNA biogenesis [BR:
sjt03016
]
PGH26_05155 (pnp)
Enzymes [BR:
sjt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PGH26_05155 (pnp)
Messenger RNA biogenesis [BR:
sjt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PGH26_05155 (pnp)
Transfer RNA biogenesis [BR:
sjt03016
]
Prokaryotic type
tRNA degradation factors
PGH26_05155 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
SPATA25
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WOV85325
UniProt:
A0ABZ0KZF1
LinkDB
All DBs
Position
1097747..1099864
Genome browser
AA seq
705 aa
AA seq
DB search
MTEHKKFTMDWAGRELTIETGQLAKQANGAVFVRYGETTVLSTATASKKPKALDFFPLTV
NYEERLYAVGKIPGGFIKREGRPSEKAILTSRLIDRPIRPLFPEGFRNDLQVISLVMSVD
QDCSSEMAAMIGSSLAISISDIPFDGPIAGVQIGRLNGEFIVNPTPAQLEASELDLVVAG
TKDAINMVEAGAKEVSEDIMLEAIMFGHEEIKKLVAFQEKIIAEVGKEKMEIELFQLDQD
LVTAIKESCNSDLVQAIQTEEKHAREEAITAVKNEVIARYEENEADDATMKQVRNVLEKL
VKDEVRRLITDEKVRPDGRGLEEIRPLSSETGILPRAHGSGLFTRGQTQALSVCTLGALG
EVQIIDGLGLEETKRFMHHYNFPNFSVGETGPIRAPGRREIGHGALGERALSTIIPDEKE
FPYTIRLVAEVLESNGSSSQASICASTMAMMNAGVPIKAPVAGIAMGLVKKGDNYSVLSD
IQGMEDHLGDMDFKVAGTSEGITALQMDIKIDGLSRQILEEALAQAKIGRMKILGHMLET
IAQPAEELSKYAPKIIMIHINPDKIRDVIGPGGKVINKIIEETGVKIDTEQDGTIYISSP
DSEMNDKAKKMIENIVREAKVGEYYMAKVKRIEKFGAFLELFPGKDGLLHISEIQEERTK
AVEDVMKLGDELFVKVIEIDNQGRVNLSRKIVIKEEKEKAEQKGE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacacaaaaagtttacaatggattgggctggcagagagcttacaatcgaaaca
ggacaacttgctaagcaagcaaacggggcggttttcgtacgctacggagaaacaacagtc
ctctctactgcaacagcttctaaaaagccgaaagcactggatttcttcccccttactgtg
aattatgaagaacgactatatgcagttggtaaaatcccaggaggattcatcaagcgtgaa
ggacgtccttctgaaaaagcgattttgacgagccgtttaattgaccgtccaatccgaccg
ctattcccagaaggattccgaaatgacttgcaagtcatttcgctagtaatgtcagtggac
caggactgttcgtcagaaatggcagcaatgatcggttcatcacttgcaatttccatttca
gatattccatttgatggtccgattgcaggcgttcaaatcggtcgtttgaatggcgaattc
atcgtcaatcctacaccggcacagcttgaagcgagcgagcttgacctcgtagtagctgga
acaaaagatgcaatcaacatggtggaagcaggcgcgaaagaagtgtctgaagatattatg
ctggaggcaatcatgttcggccatgaagagatcaaaaaactcgttgccttccaagagaaa
atcattgcagaagtaggcaaagaaaagatggagatcgaattattccaactcgatcaggat
ctcgttactgcgattaaagagagctgtaacagcgacttggtacaagcaatccagacagaa
gaaaagcatgcccgtgaagaagcaatcactgctgtgaaaaacgaagtgattgctcgttac
gaagagaacgaagcggatgacgcgactatgaaacaagtccgcaacgtattggaaaagctt
gtgaaagatgaagtccgtcgtctgattacagatgaaaaggtccgtccggatggacgtgga
cttgaagaaatccgtccactttcttctgaaacaggcattcttcctagagcgcacggttca
ggtctatttacacgcggacaaactcaagcgcttagcgtatgtacattaggtgctcttggt
gaagtacaaattattgatgggctggggctggaagaaacaaaacgcttcatgcaccactat
aacttcccgaacttcagtgtgggtgaaacaggcccaatccgtgctccaggacgtcgtgaa
attggtcacggtgcactgggagagcgcgcactctcaacaattattccagatgaaaaagaa
ttcccatatacgattcgtcttgtagctgaagttctagaatctaacggttcttcatctcaa
gcatcgatttgtgcatccacaatggcaatgatgaatgcgggtgtgccaatcaaagctcca
gtagcaggaattgcaatgggacttgtaaaaaaaggtgacaactactctgtcctgtctgat
atccagggaatggaagaccacttaggagatatggactttaaagtagcaggtacttctgaa
ggtattacagcacttcaaatggatattaaaatcgatggtctttcacgacaaatcctagaa
gaagctttggctcaagcgaaaatcggccgtatgaagattcttggtcatatgcttgaaacg
attgcacagccagcagaagaactttcaaaatatgctcctaagattatcatgattcacatt
aatccagacaaaatccgcgatgttatcggacctggaggaaaagttatcaacaagattatt
gaagaaactggcgtgaaaattgatacggaacaagatgggacaatttacatttcttctcct
gattctgagatgaacgacaaagcgaagaagatgattgaaaacatcgtccgcgaagcaaaa
gtcggcgaatattacatggctaaagtgaaacgcattgaaaaattcggtgctttccttgag
ttattcccaggaaaagatggattgctccacatttctgaaattcaagaagaacgtacaaaa
gcggtggaagacgttatgaaattgggagacgaactcttcgtcaaagtcatcgaaattgac
aaccaaggccgcgttaacttatcacgtaaaattgtcataaaagaagaaaaagaaaaagca
gaacaaaaaggcgagtaa
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