Sporosarcina jeotgali: PGH26_06060
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Entry
PGH26_06060 CDS
T10261
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03030
DNA replication
sjt03430
Mismatch repair
sjt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGH26_06060 (holA)
03430 Mismatch repair
PGH26_06060 (holA)
03440 Homologous recombination
PGH26_06060 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjt03032
]
PGH26_06060 (holA)
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_06060 (holA)
Enzymes [BR:
sjt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGH26_06060 (holA)
DNA replication proteins [BR:
sjt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGH26_06060 (holA)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGH26_06060 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
HTH_37
DNA_pol3_gamma3
CdiI_2
PCDH15_12th
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WOV85495
UniProt:
A0ABZ0KYN1
LinkDB
All DBs
Position
1273642..1274652
Genome browser
AA seq
336 aa
AA seq
DB search
MVSAAWKEIRKNPEQPIYLLTGTESYLLQETLAKIISESPGIEQHDVLNFDLEETSVDRV
IEEADTLPFLQDRKVIVAKNASFLKAKERGKEKIEHPIDQLEAWLQDPSPTATVIFTAPY
EKLDSRKKITKVMTSNAVVIEANKLTGSDLTVWVQQQGAAFGVTIDREIADYLVETTGEN
MMQLSSEIEKLAAFLEGAGTVTKEIIDRLVPRSPETEIFRLTDTYIAGNRAQTLAVYHDL
LRSGEEPIAMTSLIAGQVRLMLHVGTLKKKGYHQQQIASTLNVHPYRVKLVMNNRNSPSE
QRLLRVLNELASIDLKLKSTSGSRERVLELFFMEKL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagcagcatggaaagagattagaaaaaatccagaacaaccaatttacttatta
actggaacggaaagttacttattgcaggagacgttagctaaaattatttccgaaagcccc
gggatagagcagcatgatgtccttaactttgatttagaggaaacctccgttgatcgtgta
attgaagaagcagacacgcttcctttcttgcaagaccgaaaagtgattgtggctaaaaat
gcgtcattcttaaaagcgaaagagcgggggaaagaaaagattgagcatccgatcgaccag
ctggaggcttggctgcaagacccatccccaactgcgacggttatctttacagcgccatat
gaaaagttggactctcgtaaaaaaatcacaaaagtgatgacgtctaatgcggtagtcatt
gaagcgaataagttgactggcagtgacttgacagtttgggtacaacagcaaggggcggcg
ttcggagtaactatcgatcgggaaattgcggactacctggtggaaacaacaggtgaaaat
atgatgcagttatcaagcgaaattgagaaacttgctgcgtttttagaaggggcaggtacg
gtaacaaaagagattattgatcgcttagttccgagatctccagagactgaaattttcaga
ctgacggatacgtatatagcgggaaatcgagcgcagacgctggcggtgtatcatgatttg
ttgagaagcggagaagaaccgattgcgatgacttcgttaatcgccggacaagtccgactg
atgcttcacgtggggaccctgaagaaaaaagggtaccatcagcagcaaatcgccagtacg
ctgaatgtgcatccttatcgggtgaagctcgttatgaataatcgaaacagtccttctgaa
caacgattgctgcgagtgttaaatgaacttgcgtcaatcgatttgaaattgaaatccact
tcaggcagccgggaaagagttcttgaactgttctttatggaaaagttgtaa
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