Sporosarcina jeotgali: PGH26_08160
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Entry
PGH26_08160 CDS
T10261
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGH26_08160 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_08160 (ruvB)
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_08160 (ruvB)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGH26_08160 (ruvB)
RecFOR pathway proteins
PGH26_08160 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
NB-ARC
AAA_14
AAA_22
AAA_3
TsaE
RNA_helicase
bpMoxR
AAA_18
DUF815
Sigma54_activ_2
AAA_24
AAA_25
NACHT
NTPase_1
AAA_17
NPHP3_N
IstB_IS21
AAA_28
Rad17
Bac_DnaA
AAA_33
PP2C
ABC_tran
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WOV82917
LinkDB
All DBs
Position
complement(1665945..1666949)
Genome browser
AA seq
334 aa
AA seq
DB search
MDSRVLSSELSDFDEGFEQSLRPQRLAHYIGQEQVKDNLSIFIEAARGRSESLDHVLLYG
PPGLGKTTLAAVIANEMGVNLRMTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCLDIVVGKGPSAKSIRLDLPPFTLIGATTRAGSLSAPLRDRFGVPLRLE
YYEIDPLKEIVMRSAGLFDVKIDDQAAVEIARRSRGTPRISNRLLRRVRDYAQVRGNGTI
SIDIAKEALEMLQVDSLGLDHIDHKLLTGMIERFRGGPVGLETLAASIGEESVTLEDVYE
PYLLQIGFIQRTPRGRIASPLAYEHFGYPLPEQH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggattcacgcgtactttcaagtgaactttcggattttgatgaaggatttgaacaatca
ctgcgcccgcagcggttagcgcattatataggacaagaacaagtaaaagacaatttatcg
attttcatagaagctgcacgcggacgaagtgaaagtttggatcacgtgctgttatatggt
cctcccgggctcggaaagacgacacttgctgcggtcatcgcgaatgaaatgggtgtcaat
ctgcggatgacaagcggcccggcgatagaacggccgggtgatttggctgcagtagtgtct
tcattggaacctggagatgttttattcatcgatgaaatccatcgtttgaatcgtgcgatc
gaagaagtactgtatcccgcaatggaagatttctgtctggatatcgttgttgggaaagga
ccttctgctaaatcgattcgacttgacctgcctccgtttacattgatcggggcgacaaca
cgtgcagggtcactttccgcaccgcttcgggatcgatttggtgttccgctgcgtcttgaa
tactatgaaatcgatccgctgaaagaaatcgtcatgagaagcgcgggtttgttcgatgtc
aaaatcgatgatcaggcggcggtagaaatcgcgcgcaggtcaagaggaaccccgcgtatt
tccaatcgtttattgcgcagggtgcgagactatgcgcaagtgcgcggcaatggtacaatt
tctatcgacattgcaaaagaagcactggaaatgctgcaagtagactcgcttggacttgat
cacattgaccataagttattgacaggcatgatcgagcggttccggggaggacctgtcggt
ttggaaacactggctgcaagtattggggaagagtcggtcacgctcgaagacgtctatgaa
ccatacttattgcaaattggtttcatacagcggacaccgcgcggaagaatcgcatcgccg
cttgcgtatgaacactttggctatccactgccggagcagcactga
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