Sporosarcina jeotgali: PGH26_09535
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Entry
PGH26_09535 CDS
T10261
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGH26_09535 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjt03019
]
PGH26_09535 (recQ)
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_09535 (recQ)
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_09535 (recQ)
Messenger RNA biogenesis [BR:
sjt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PGH26_09535 (recQ)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGH26_09535 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF4953
Motif
Other DBs
NCBI-ProteinID:
WOV83167
UniProt:
A0ABZ0KSB7
LinkDB
All DBs
Position
complement(1929059..1930831)
Genome browser
AA seq
590 aa
AA seq
DB search
MMEQALAVLAEKFGYTSFRTGQEQVIQHVMDGQDALCVMPTGGGKSLCYQVPAMLFEGTV
LVISPLISLMKDQVDALWQLGIPAAYINSTLSSEEYFGILENAIAGQYRLLYIAPERLES
ESFLRELSRMNVPMIAIDEAHCISQWGHDFRPSYRNISRVLNCFDEKPVLLALTATATPN
VREDIRIQLGIPEEQTVMTGFERSNLVFTVVKGQNREKFIKEVASKNKGEAGIVYAATRK
AVESIYELLNRAGFEVAKYHGGMSDTERHHEQERFLNDEATVMVATNAFGMGIDKSNIRY
VIHYQMPKNMESYYQEAGRAGRDGLDSECVLLFASQDIQTQRFLIDQSPDPSRVPAELEK
LQGMIDYCHTENCLQQYIVTYFGEKEAPKCGRCANCTDTREQMDVTLEAQKVLSCVIRMG
QRFGKTMIAQVLTGSRNKKLLDFKFDQLTTYGLLKEKNAKEVSDFIEFLISANCLQVENG
QFPTIRVAERGKEVLLGNDKIMRKGSFVSKALTENDPLFEQLRQLRRQLAQEAGVPPFVV
FSDKTLKDMAMKKPATSAEFLDVVGVGQTKLEIYGEAFIEEIKSFQLQEI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacaagcacttgctgtgctcgctgagaaatttggatatacatcattccgtaca
ggtcaagagcaggtcatccagcacgtgatggatggacaggatgctctttgtgttatgccg
actggcggcggaaaatcgttgtgctatcaagttccagctatgctatttgaaggaacggtc
ctcgtcatatccccactcatttcccttatgaaagatcaggtagatgcactttggcaactc
ggaattcctgctgcctacataaacagcacgttatcctcagaggagtatttcggaattctt
gaaaatgcgattgcaggacaatatcgccttctttacattgcacctgaacgactggagtcc
gaatcatttctgagagaattaagccggatgaacgttccgatgattgcaattgatgaggca
cactgtatttcccaatggggtcatgatttcaggccgagttaccgaaatatcagccgtgtc
ttgaactgttttgatgaaaaaccggttttgcttgcgttaacggcaacagctacgccgaac
gttcgggaagatattcgcatacagctcggaattcccgaagaacagacggtgatgacaggg
tttgagcggtcgaacttagtgtttacggttgtaaaaggacaaaatcgcgagaagtttatc
aaagaagttgcaagtaaaaataaaggggaagctggaattgtttatgcagcaacccgaaaa
gcggttgagagtatctatgaattgctgaaccgtgctggatttgaagtggcgaagtatcat
ggcggaatgtcagatacagagcggcatcacgagcaagaacgtttcctgaatgatgaagca
acggtgatggtcgcaacaaatgcctttggaatgggaattgacaagtcaaatatccgatac
gtcattcactaccagatgccgaaaaatatggaaagctattatcaagaagctggacgcgcg
ggacgggatgggttggatagtgaatgtgtgcttctttttgcttctcaagatatccagacg
cagcgttttcttatcgaccaatcaccagatccttcccgagtgccagcagagctcgaaaaa
ctgcaaggaatgatcgactactgccatacagaaaattgtttgcagcaatacatcgtgacg
tattttggagaaaaagaggctccgaaatgcggcagatgtgcaaattgtacagatacacga
gagcagatggatgtcacattggaagctcaaaaagtattgtcctgtgtcattcgaatggga
cagcggttcgggaagacgatgatcgcacaagtattgacaggttctagaaataaaaaattg
ctggactttaagtttgatcaattgaccacatatggtttactgaaagaaaagaatgcgaaa
gaagtttccgattttatcgagtttctgatttcggcgaactgtttacaagtcgagaacggg
cagtttccgacaatccgtgtcgctgagcgcggcaaggaagtcctgcttggcaatgataag
attatgagaaaaggttcatttgtttcgaaggcactgacagaaaacgatccattgtttgaa
cagcttcgccagctgcggcgccagcttgctcaagaagcgggtgttccgccattcgttgtg
ttctcggacaagaccctgaaagatatggcgatgaaaaaaccagcaacgtctgcagagttt
ctggacgttgtaggtgtaggacaaacgaagctcgagatttatggagaggcattcattgaa
gagattaaatcttttcagctccaggagatttga
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