Sporosarcina jeotgali: PGH26_10650
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Entry
PGH26_10650 CDS
T10261
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03420
Nucleotide excision repair
sjt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGH26_10650
03430 Mismatch repair
PGH26_10650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_10650
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_10650
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGH26_10650
MMR (mismatch excision repair)
Other MMR factors
PGH26_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DUF7365
APC1_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOV83382
LinkDB
All DBs
Position
complement(2158065..2160206)
Genome browser
AA seq
713 aa
AA seq
DB search
MEDFFERKKRQLNIQLNDVQKQAVLTTEGPLLLLACPGSGKTTTIIMRIGYLIEELGVKP
RRIKAITFSKASAKDMQKRFSTLFPELPAADFSTIHSLAFTISKKWLAKQGRQFTLLEGF
PKQNALKAACRQVLKENATEDQLNSLSTYISLMKNQMIPAENWSEKDEPFEKASKIARHY
ETVKNGGADNTLLDFDDLLLAAEQAMRTDEDLGAEFQSNYDYILTDESQDTSLVQHKIVE
HLTAMHGNLCVVADDDQSIYAWRGADPDYLMDFKLVYPEAKLLYMEQNYRSSSEIVTTSA
TFIKRNKKRWDKKMHTENGSKGKIQLRRFTNPKQQLEYVTYELLAEENLSEVAILFRNNA
SSTPFVNELHRRGIPFYMKDADDKFFSHWVVQDILNFMRLSFNLERKDIFAKVAGKMQLF
VSKSALQQFERSMIKGNVFDAFKEMAVLKDSQIRKLDAYKDVYKKIPDMRPAQIIRMIRY
ELGYEESLVSMSTKFGYRADSLKGILDTLEGIAEQTRTMIEFAEQLKTLEEAVQQAKRDP
AGQAVTLSTFHSAKGLEFKRVFMIDLVKGTIPSEDDLTDPQLLEEARRLFYVGMTRAKDR
LELLSFSMEDGKTKEDSKFVNEVRGILLPKRTDSAKSTSSLVKTAPKSIEVNPNGIGDLQ
LLSKGALIKHRVFGKGEILEVGSESIEIRFAAATKRLALQPVLEKRMLEAAEL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttttttgaacgtaaaaaaagacagctgaatatccaattgaacgatgtgcaa
aaacaggcggtccttacaacggaaggaccccttttgctgctggcttgtccaggctcaggg
aagacgacaaccataataatgcgcatcggttatttaatagaagaacttggcgttaaaccg
cggcgtataaaagccatcacttttagtaaagcttctgcaaaagatatgcagaaacgattc
tcgacattgtttccagaattaccagcggcggatttttcgacaatccacagtttagcgttt
acgatttctaaaaagtggcttgcaaaacaagggcgtcaatttacactgctcgaaggattc
ccaaaacaaaacgcactgaaagcggcatgccgtcaagtgttaaaagaaaatgcaacagaa
gaccagctaaattcgctttctacgtatatcagcctaatgaagaatcaaatgattcctgca
gagaactggtcggaaaaagatgagccatttgagaaagcatcaaagatcgcacgtcactat
gaaacggtgaagaatggcggtgcagataacacgctgctcgactttgatgatcttttatta
gcagctgaacaagctatgcgaacggatgaagatctcggtgcagaattccaatccaactat
gactacatcttaacagacgaaagccaagatacatcgctcgtccaacacaaaatcgtggaa
catctgacagccatgcacggaaatctctgtgtcgttgcagatgatgatcagtcgatctat
gcatggaggggagcggatccagattatttaatggatttcaagcttgtgtatccagaagcg
aagctcttgtatatggaacaaaactatcgatcttcttctgaaatcgtgacaacatcagcg
acattcatcaaacgaaataaaaaacgctgggataaaaagatgcatacggaaaacggttca
aaaggaaaaattcagttgcgccgcttcaccaatccaaagcagcaattggagtatgtgacg
tacgaacttcttgctgaagagaatttgagtgaagttgcaattctattccggaataacgct
tcctctacgccttttgtaaacgaactccatcgcagaggcattcctttttatatgaaagac
gcagatgataagtttttctcccactgggtcgtccaagatattctcaatttcatgcggctg
agtttcaatctagagcgaaaagatatttttgcgaaggtagcagggaagatgcagttattt
gtatcgaaatcggctttacagcaatttgagcgaagtatgataaaggggaatgtgttcgat
gctttcaaagagatggcggttttgaaagatagccagattaggaagctcgatgcatataag
gatgtctacaaaaaaattccagatatgagacctgcacaaatcatccgcatgatccggtat
gagctgggatatgaagaaagtctggtaagcatgtcgacaaagttcggatatcgtgcggat
agcttaaaaggaattttagatacgttagaaggcattgctgaacagacaaggacgatgatt
gagtttgcagaacagctgaagacgctggaagaggcggtgcagcaggcaaaacgtgatcct
gctgggcaagccgtaacgctttccactttccatagtgcaaaagggttagagtttaaacgg
gtgtttatgatcgaccttgtcaaaggaaccattccttcagaggatgacctgacggatcct
caattgctagaggaggcaagacgcttattttatgtaggcatgacccgagcgaaagacaga
ctggaattgttgtccttttccatggaagatggaaagaccaaagaggactccaagtttgtg
aatgaagtacgggggattttgttgccgaaacgcacggattctgcaaaatccacaagcagt
ttggtgaaaacagcccctaaatctatcgaggtgaatccgaatggaatcggggatcttcaa
ctattaagtaagggtgcactcataaagcatcgggttttcggtaaaggagaaatcctcgaa
gtgggcagcgaatcgattgaaattcgatttgccgctgctacaaagagattggcattacag
cccgtgcttgaaaagcgaatgctggaagcagctgagctatga
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