Sporosarcina jeotgali: PGH26_11400
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Entry
PGH26_11400 CDS
T10261
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGH26_11400 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_11400 (uvrB)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGH26_11400 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGH26_11400 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA
P-loop_SecA
HEM4
AAA_19
AAA_30
UvrD-helicase
SLFN-g3_helicase
TrwB_AAD_bind
AAA_7
DUF87
AAA_22
AAA_16
AAA_25
DUF8810
DUF3071
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
WOV83503
UniProt:
A0ABZ0KVE8
LinkDB
All DBs
Position
complement(2290232..2292214)
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AA seq
660 aa
AA seq
DB search
MTDTFNLQAPYTPQGDQPAAIKKLVAGIKNGEKHQTLLGATGTGKTFTVSNVVTEINKPT
LVIAHNKTLAGQLYSEFKEFFPDNAVEYFVSFYDYYQPEAYVPQTDTYIEKDSSINDEID
KLRHSATASLFERKDVLIVASVSCIYGLGSPEEYGSHMISLRPGLEIDRNQLLRKFVDNL
YERNDVSFTRGTFRVRGDVVEIFPASQDERCIRIEFFGDEIDRLREVDALTGEVLGEREH
VAIFPNSHFVTGEAKMVKAIERIEIELEEQLKIMRENDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLSLRDAGETPYTLIDYFPDDFLIVADESHVTLPQIRGMYNGDQARKKV
LVEHGFRLPSALDNRPLMFEEFEKHVNQAIYVSATPGPYEIEHTPKMVEQIIRPTGLLDP
IIEVRPIEGQIDDLLDEINERSKRNERVLITTLTKKMSEDLTDYLKEAGVKVNYLHSEIK
TLERIEIIRELRLGTYDALVGINLLREGLDIPEVSLVTILDADKEGFLRSERALIQTIGR
AARNSEGRVIMYADRYTDSMNKAIEETERRREKQMAYNEEHNITPKTIQKGIRDVIRATQ
ASEESLSFMDKVTEGKKLTKEEKLTLLASLEKEMKESAKALDFERAAELRDTILELKAER
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatacatttaatctgcaagccccatatacaccccaaggcgatcagcctgctgct
atcaaaaaattagtcgctggtatcaagaacggcgagaagcatcagacgctgctgggggca
acaggtacaggtaagacatttaccgtttccaacgtcgtaacagaaatcaataaaccgact
ttggtcatcgcacataacaaaacgcttgcagggcagctttacagtgaattcaaagagttc
ttccctgataatgcagttgaatactttgtcagcttttacgattattatcagccggaagcg
tatgtcccgcaaacagatacgtatatagagaaagactcaagtattaatgatgaaatcgat
aaattgcgtcactctgcaactgcatccctttttgaacggaaagatgtactgattgtcgcg
tcggtttcttgtatatacggtttggggtcaccggaagaatatgggtctcacatgatatcc
ctccgtcccggactcgagattgacagaaatcagctattacggaaattcgttgataactta
tacgaacggaacgatgtgagttttacacgcggaacgttccgtgtaagaggggatgtagta
gaaatcttcccggcgtctcaagatgaaagatgtatccgcatagaatttttcggagacgaa
atcgatcgattgcgtgaagtagatgcactgacaggtgaagtgctgggtgaacgcgaacac
gtcgcaatcttcccgaattcccacttcgttacaggtgaagcgaaaatggtcaaggcgatc
gaacgaattgaaatagaattggaagaacagctgaaaatcatgagagagaacgacaaactc
ttagaagcacagcgactagagcagcgaacacgatacgacttagaaatgatgcgtgagatg
ggattctgttcaggaatcgaaaactattcacgtcacttatcgcttcgtgatgctggggag
acaccctatacgctgattgactatttccctgatgacttcctcattgtggcagatgaaagc
cacgtgacgcttccgcaaatccgaggcatgtataacggagaccaagcgaggaaaaaagtt
ctggttgaacatggattccggcttccttctgctctggacaaccgtccgctcatgttcgaa
gaatttgaaaagcacgtgaaccaggcgatttatgtctctgcaacaccaggaccgtatgaa
atagaacatacacctaaaatggtagaacaaattatccgtcccaccggtttgctcgatccg
atcattgaagtgcgtccgatcgaaggacaaattgatgatctgctcgatgaaatcaacgag
cgcagtaaaagaaatgaacgggtgcttatcacaacacttactaaaaaaatgtctgaggac
ttgacggattatttgaaagaagctggagtgaaagtgaactatcttcactcggagattaaa
acactggagcgaatcgaaataattcgcgaactgcgactgggaacttacgatgccttagta
ggcattaacttgttgagggaaggtctcgatatcccagaagtatcactcgtaaccattctc
gatgcggacaaagaagggttccttcgttcagaacgtgcactcatccaaacaattggacgc
gcagcacggaactctgaaggacgagtcattatgtatgcggatagatatacggattcgatg
aacaaagcaattgaggaaaccgagcgccgcagagaaaaacaaatggcgtataacgaagaa
cataatataacaccgaaaacgattcaaaaaggaattcgcgatgtcatccgtgcgacacaa
gcttctgaagaatcgctttcgtttatggataaagtgacagaaggcaagaagttgacgaaa
gaagaaaaactgacattgctggcatcgcttgaaaaagaaatgaaagaatcagcgaaggcg
ctcgactttgagcgtgctgctgagcttagagataccatattggaattgaaagcggaaagg
tga
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