Sporosarcina jeotgali: PGH26_11450
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Entry
PGH26_11450 CDS
T10261
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sjt Sporosarcina jeotgali
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjt03019
]
PGH26_11450 (yhaM)
Messenger RNA biogenesis [BR:
sjt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PGH26_11450 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WOV83512
LinkDB
All DBs
Position
complement(2298466..2299404)
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AA seq
312 aa
AA seq
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MKKLLDHKVGEPVDLFLFIKQSTKGVTQQGSPFMSLVLQDKSGDLEAKLWDTGEEQERLY
PAAAIVRVGGEVHEYRGKNQLRIKSIRPAKADEGITMSDLVPSAEKSKEELMEELMQFFF
EMKNPQIQRITRHLIKKHQEAFTMYPAATRNHHDYVSGLLDHVVSMLKLSKAVSDLYPTL
NKDLLYSGVILHDIGKVIELSGPVAAHYTVEGNLLGHISIMVTEISKAADELDISGEEVM
LLQHMVLSHHGKEEWGSPKRPMLPEAEMLHYIDNIDAKMNMLNRAMSKTEPGEFSERIFP
LENRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactattagatcataaagtaggggaaccggtagacttattcctcttcatcaaa
caatccacaaaaggggtcacacagcaaggaagccccttcatgtcacttgtactgcaagat
aaaagcggagatttggaagcaaagctctgggatactggagaagagcaggagcggttgtat
ccggcagctgctattgttcgcgttggcggggaagtgcacgagtaccgcgggaaaaaccag
ctgcgcattaagagcattcgccctgcaaaagcagatgaaggaattacgatgtcggatctg
gtgccatccgctgaaaaaagcaaagaggaactgatggaggagttaatgcaattcttcttc
gagatgaagaatcctcagattcaacggataacccgtcatttgattaagaagcaccaggaa
gctttcacgatgtacccagctgccacacggaatcatcatgactatgtatcaggtttgctt
gatcatgtcgtatcgatgctgaaactttcgaaagcagtgtcggatctgtatccaactttg
aacaaagatttattgtattctggtgtgattttgcatgacatcgggaaagtcattgagtta
tcaggaccggtggcggcgcactacaccgtagaagggaatttactgggacacattagtatc
atggtgacggaaatctcgaaagctgcggatgaacttgatatttcaggtgaagaagtgatg
ctccttcagcacatggttctttcccaccacggaaaagaagagtggggcagcccgaaacgt
ccgatgctgcctgaagccgagatgctccattacatcgacaacatcgatgctaaaatgaac
atgctgaaccgggcgatgagcaaaactgaacccggtgagttctctgaacgcattttccca
ttggagaatcgttcattctataagccaacatttgaataa
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