Sporosarcina jeotgali: PGH26_12655
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Entry
PGH26_12655 CDS
T10261
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03420
Nucleotide excision repair
sjt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGH26_12655 (pcrA)
03430 Mismatch repair
PGH26_12655 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_12655 (pcrA)
Enzymes [BR:
sjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGH26_12655 (pcrA)
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGH26_12655 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
PGH26_12655 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH_3
AAA_11
AAA_22
ResIII
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WOV83720
LinkDB
All DBs
Position
complement(2501498..2503723)
Genome browser
AA seq
741 aa
AA seq
DB search
MKELAQDLLTGMNPEQAKAVKKTEGPLLIMAGAGSGKTRVLTHRIAYLVIEKNVYPSKIL
AITFTNKASREMRNRIDGLLGEGSGDRMWVSTFHSMCVRILRRNIDRIGFSKTFSILDSS
DQLSAIKSVLKEQNLDPKQYDPRTLLNIISSAKNECIDAKEYRAGVNESNPYDRVIADVF
DGYTKKLRKNQSLDFDDLIMLTLRLFEQVPDVLEFYQDKFQYIHVDEYQDTNHAQYRLVQ
MLAEKFRNICVVGDSDQSIYKWRGADIGNILSFEKDYKDAEVILLEQNYRSTQNILQAAN
DVIKNNESRYDKRLRTDNDEGDFITVYKATDEKDESQYVVRKIIELQQEQGFSLDQFAVL
YRTNAQSRMIEEYLVKSNLEYTIVGGTKFYDRKEIKDLLAYLRLIANNEDDLALARIINE
PKRSIGATSFERMARFAIENDRSIFDAMQELDFMGLTKKAAVESAKFRDLIQNFTQMQEF
LSVKELTEQVLDKTGYRAMLEREKTIESESRLENIDEFLSVTEAFEKRAEEDEGDKSLVA
FLTDLALIADIDSLDKEENQSTEKIVLMTTHSAKGLEFPVVFVIGMEENIFPHARSIGNE
EEMEEERRLAYVAITRAEQKLFMSSASSRMLYGKFSYNNPSRFINEISDEVIETENASGG
FSIGGSRNDEPKRAAVKKPVYKTTGGEKLGWSAGDKAAHKKWGTGTVVSVKGSADDVELD
IAFPEVGIKRLLAKFAPIEKV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactcgcacaagatttattgacgggcatgaaccctgaacaggcgaaagcggtg
aagaaaacagaaggtcctttgctcattatggcgggagcgggatctgggaaaacacgagta
ttgacgcatcgaattgcgtatctcgtcattgagaaaaacgtgtatccatctaagattctt
gccatcacttttacaaacaaagcgagtcgggaaatgcgtaatcgaatcgatggattactc
ggtgaaggttcaggcgaccgcatgtgggtctcgaccttccactcgatgtgcgtgcggatt
ttgcgtcgcaacattgaccgaatcggcttttccaagacattctccattttggactcctca
gatcagttatctgctattaaatcagtcctgaaagaacaaaacctagacccaaaacaatac
gacccgcggacattgcttaacattatcagttctgcaaaaaacgaatgcatcgatgcaaaa
gaatatcgggcaggtgtgaacgaatcgaacccgtacgaccgtgtcatcgcagatgtcttt
gatggctatacaaagaaactgcggaagaaccaatcactcgattttgacgatctcattatg
ctgacactgcggttattcgagcaagttccagatgtgcttgagttttatcaagacaagttc
cagtacattcatgtcgatgaataccaggatacaaaccatgcccaataccgcctggtacaa
atgcttgcggagaagttccgcaatatttgtgtcgtcggtgattccgatcagtccatctac
aagtggcgcggcgccgatatcggcaacattctgtcgtttgaaaaagactataaagacgca
gaagtcattttactcgaacagaactatcgctcgacccaaaacattttacaagcagccaac
gatgtcataaaaaataatgaaagccgctatgacaaacggctgcggacagataatgatgaa
ggggatttcatcaccgtttataaagcgaccgatgagaaagatgagtcgcaatacgttgtc
cgtaaaatcattgagctgcagcaggaacaggggttttcactcgaccagttcgcggttctt
taccggacgaacgcgcaatcacggatgattgaggaatacttagtgaagtcgaatctggaa
tatacgattgtcggcggcacgaagttctatgatcgcaaagaaatcaaagacttgctcgca
tacttgcggctcattgcgaataacgaagatgaccttgcacttgcgcggatcattaacgaa
ccgaagcgcagcattggagccacatcgtttgaacggatggccagatttgcgattgaaaac
gaccggtccattttcgatgcgatgcaagagctggacttcatgggtctgacgaaaaaagca
gcagtggaatcagcgaagttccgcgatttgatccaaaactttacccagatgcaggagttt
ttgtctgtcaaagaactgacggagcaagtgttggataaaaccggataccgcgcgatgctc
gaacgcgaaaaaacgattgaatcggaaagtcgtttagagaacatcgacgagtttttatcg
gttacagaagcatttgaaaaaagggcagaagaagatgaaggcgacaaatcactcgtcgcg
tttttgacggatctggcactcatcgcagatatcgactctctcgataaagaagagaaccaa
tcgacagaaaaaatcgtcttaatgacgacacactctgcaaaaggtctggagttcccagtc
gtttttgtaattggtatggaagaaaatattttcccgcatgcccgttcgattggaaacgaa
gaggaaatggaagaagaacggcgtcttgcgtatgtagccattacacgtgcagagcagaag
ttgttcatgtcttctgcttcaagccgaatgctgtacggcaaattcagttacaacaatcca
tctcgatttattaacgagatttctgatgaagtcatcgaaacagagaacgcttctggcggt
ttctcaatcggcggatcacgcaatgatgaaccaaaacgtgcggctgtgaaaaagcctgtc
tacaaaacaacaggcggggaaaagctaggatggtcagcgggcgacaaagccgcgcacaaa
aagtggggtacaggcacggttgtcagcgtcaaaggttcagcggacgacgttgaactcgac
atcgccttcccggaagtcggcattaaacgattgcttgcgaaatttgcaccgatagaaaaa
gtgtaa
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