Sporosarcina jeotgali: PGH26_14650
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Entry
PGH26_14650 CDS
T10261
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sjt Sporosarcina jeotgali
Pathway
sjt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sjt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGH26_14650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjt03021
]
PGH26_14650
03400 DNA repair and recombination proteins [BR:
sjt03400
]
PGH26_14650
Enzymes [BR:
sjt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGH26_14650
Transcription machinery [BR:
sjt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PGH26_14650
DNA repair and recombination proteins [BR:
sjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PGH26_14650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF961
Motif
Other DBs
NCBI-ProteinID:
WOV84086
UniProt:
A0ABZ0KXB6
LinkDB
All DBs
Position
complement(2900898..2901842)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVMVADDSMFGKFVIEPLERGYGNTLGNSLRRVLLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVATIILNVKQLALKIYSDDEKVIEIDVKGEGKVTAADITHDSDVEV
LNPDLHIATLGKNGHLRMRMYAVRGRGYAPSVQNKRDDLAIGVIPIDSIYTPVSRVNFQV
ENTRVGQSTNFDKLTLDVWTDGSIGPKESVSLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVMELANKSEDEMMKVRNLGRKSLEEVK
LKLEELNLGLRSED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgagaaaccgaagattgaaaccgttatggttgctgatgattccatgttt
ggtaagtttgttatcgaaccattggaacgagggtatggaaatactttagggaattcatta
cgccgcgtcttgttgtcttctctgcctggagctgccgtaacatcgattcaaatcgatggc
gttcttcatgagttctcaacagtcgagggtgtcgtagaagacgtagcgactattattcta
aacgtgaaacaattagcacttaaaatctattcggatgacgaaaaagttattgaaatagat
gttaagggcgaagggaaggtaactgctgctgacattactcatgatagtgatgttgaagta
ttgaatccggatcttcatattgcgacacttgggaaaaacggtcacctccgcatgcgcatg
tatgcagtacgaggaagaggctatgctccttcggtacaaaacaaacgtgatgaccttgcg
attggtgtaattccaatcgattctatctacacacctgtatctcgtgtaaacttccaagtt
gaaaatactcgggttggtcaaagcacgaactttgataagttaacactggatgtttggaca
gatggtagtattggtcctaaagaatctgtttcattgggtgctaaaatccttacggaacat
ttaaatatttttgtcggcatgacagatgaagcccaaactgcagaaatcatggtagaaaaa
gaagaagaccaaaaagaaaaagttcttgagatgactatcgaagaattagatctttctgtt
cgttcttacaactgcttgaagcgtgcaggcatcaataccgttatggaacttgctaacaag
tccgaggacgaaatgatgaaagtgcgaaatcttggccgaaagtcacttgaagaagtaaag
ctgaagttggaagagttgaatctaggattacgctctgaagattga
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