Sulfurisphaera javensis: SJAV_09230
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Entry
SJAV_09230 CDS
T10807
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sjv Sulfurisphaera javensis
Pathway
sjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SJAV_09230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjv03019
]
SJAV_09230
Messenger RNA biogenesis [BR:
sjv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SJAV_09230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BFH72979
UniProt:
A0AAT9GQ85
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Position
complement(860171..861439)
Genome browser
AA seq
422 aa
AA seq
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MTVTKTVNGVEIKILQGYNEIGGNCIVIKDKDSEIVFDQGIRFSRFRKFYNTRIQPLSPQ
EMKELGIIPPSDEYKKIFISHYHLDHLGLLFHLPPDAEVYVPDTEILEKFLEPYKNSPGW
TTYVPPSVAININNAISNQDNVIPFYVEHSAYPAVAYYLNNPNVRILYTGDFRLTSPIDS
IDSELHSKIHNKLLLKEITAKGYSTDVLIIEGTNFSSPSTPTNEYTFNNIVFEIFNIHKN
SLIMVLLDPLDVEAIFTILHYVNYYGRKPVITNRRLLKMIDYWTRRFGWNKEIYQLLDEN
FEQVFEVVDEEELTKSQSEYVILTAKDEPIELARKLKNLEGTVVISLSTETKSESGEDES
VEDVWFKTLGFIVYRLRISGHYYPYELRDILDTIKPKYVIPVHTEASRTVCEFVKRFGYQ
CL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaactaagactgtaaacggagttgagataaaaatacttcaaggttataatgaa
ataggaggaaattgtattgtaataaaggataaggattctgagatagtctttgatcaaggg
atacggttctcaagatttcgcaagttttacaatacaaggatacaaccacttagtcctcaa
gaaatgaaggaattaggaataattccgccatcagatgaatacaaaaagatcttcatatcc
cattatcatttggaccatttgggtcttttatttcatctacccccagatgctgaagtttat
gtgccagatactgagatattggaaaaatttcttgaaccttataagaactccccaggctgg
acaacttacgtaccaccttctgtcgctataaatattaataatgcaatttcaaatcaagat
aatgtaattcctttttacgtagaacatagtgcttatccagcagttgcttactatttgaac
aatccaaacgtgagaatactttacactggagactttaggcttacctctccaattgatagt
attgattcggaattacattcaaagattcacaataagttacttttaaaggaaataactgca
aaaggttattccacagacgttttaataattgaaggaactaacttttcatcaccttcaact
cccactaacgaatatactttcaataacattgtttttgagatttttaacatacataaaaac
tcccttatcatggttttgttagaccctctagatgttgaggcaatatttacaattttgcat
tatgttaattactatggtaggaaaccagtaattacaaatagaagattactaaagatgatt
gattattggacaagaagatttggatggaataaggaaatttaccaattacttgatgaaaac
tttgaacaagtctttgaggtagttgatgaagaagaactaactaaatctcaatccgaatat
gtgattttaacagcgaaagatgagccaatagaattagctagaaaacttaagaaccttgag
ggaactgtcgtaatatcattgtcaactgaaactaaaagcgaaagtggagaggatgaaagt
gttgaggatgtatggtttaagactttaggttttatagtttataggctaaggatttctggt
cattattatccttatgaattaagggatatactggatacgataaagccaaaatacgtgatt
ccagtgcacacagaagcttctaggacagtttgcgaatttgtgaagaggtttggttatcag
tgcctttaa
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