KEGG   Sulfurisphaera javensis: SJAV_09230
Entry
SJAV_09230        CDS       T10807                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sjv  Sulfurisphaera javensis
Pathway
sjv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sjv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SJAV_09230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjv03019]
    SJAV_09230
Messenger RNA biogenesis [BR:sjv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SJAV_09230
SSDB
Motif
Pfam: Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BFH72979
UniProt: A0AAT9GQ85
LinkDB
Position
complement(860171..861439)
AA seq 422 aa
MTVTKTVNGVEIKILQGYNEIGGNCIVIKDKDSEIVFDQGIRFSRFRKFYNTRIQPLSPQ
EMKELGIIPPSDEYKKIFISHYHLDHLGLLFHLPPDAEVYVPDTEILEKFLEPYKNSPGW
TTYVPPSVAININNAISNQDNVIPFYVEHSAYPAVAYYLNNPNVRILYTGDFRLTSPIDS
IDSELHSKIHNKLLLKEITAKGYSTDVLIIEGTNFSSPSTPTNEYTFNNIVFEIFNIHKN
SLIMVLLDPLDVEAIFTILHYVNYYGRKPVITNRRLLKMIDYWTRRFGWNKEIYQLLDEN
FEQVFEVVDEEELTKSQSEYVILTAKDEPIELARKLKNLEGTVVISLSTETKSESGEDES
VEDVWFKTLGFIVYRLRISGHYYPYELRDILDTIKPKYVIPVHTEASRTVCEFVKRFGYQ
CL
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgactgtaactaagactgtaaacggagttgagataaaaatacttcaaggttataatgaa
ataggaggaaattgtattgtaataaaggataaggattctgagatagtctttgatcaaggg
atacggttctcaagatttcgcaagttttacaatacaaggatacaaccacttagtcctcaa
gaaatgaaggaattaggaataattccgccatcagatgaatacaaaaagatcttcatatcc
cattatcatttggaccatttgggtcttttatttcatctacccccagatgctgaagtttat
gtgccagatactgagatattggaaaaatttcttgaaccttataagaactccccaggctgg
acaacttacgtaccaccttctgtcgctataaatattaataatgcaatttcaaatcaagat
aatgtaattcctttttacgtagaacatagtgcttatccagcagttgcttactatttgaac
aatccaaacgtgagaatactttacactggagactttaggcttacctctccaattgatagt
attgattcggaattacattcaaagattcacaataagttacttttaaaggaaataactgca
aaaggttattccacagacgttttaataattgaaggaactaacttttcatcaccttcaact
cccactaacgaatatactttcaataacattgtttttgagatttttaacatacataaaaac
tcccttatcatggttttgttagaccctctagatgttgaggcaatatttacaattttgcat
tatgttaattactatggtaggaaaccagtaattacaaatagaagattactaaagatgatt
gattattggacaagaagatttggatggaataaggaaatttaccaattacttgatgaaaac
tttgaacaagtctttgaggtagttgatgaagaagaactaactaaatctcaatccgaatat
gtgattttaacagcgaaagatgagccaatagaattagctagaaaacttaagaaccttgag
ggaactgtcgtaatatcattgtcaactgaaactaaaagcgaaagtggagaggatgaaagt
gttgaggatgtatggtttaagactttaggttttatagtttataggctaaggatttctggt
cattattatccttatgaattaagggatatactggatacgataaagccaaaatacgtgatt
ccagtgcacacagaagcttctaggacagtttgcgaatttgtgaagaggtttggttatcag
tgcctttaa

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