Sulfurisphaera javensis: SJAV_13490
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Entry
SJAV_13490 CDS
T10807
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sjv Sulfurisphaera javensis
Brite
KEGG Orthology (KO) [BR:
sjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjv03016
]
SJAV_13490 (endA)
Enzymes [BR:
sjv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SJAV_13490 (endA)
Transfer RNA biogenesis [BR:
sjv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SJAV_13490 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BFH73405
UniProt:
A0AAT9GRC7
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All DBs
Position
1257277..1257819
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AA seq
180 aa
AA seq
DB search
MIGELLKDKIIIKNIEDARKIYKLGYYGKPLGISKPKSAEEVNSELILSLIEGLYLTKKG
ILDVTYNGEKLDFQKLYDIGIKQIPRFRILYTVYEDLREKGYVVRSGIKYGADFAVYTVG
PGIEHAPYLLIALDENSEITSNEILGFGRVSHSTRKELILGIVNLNTGKIRYIMFKWLKM
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgataggagaacttctaaaagataaaattattataaaaaacattgaagatgcaagaaaa
atttataaactaggatattatggaaagccactaggtatttctaagcctaagtcagcagaa
gaagttaatagcgaattaattctatcacttatagaaggattatatttaactaaaaaagga
attttagatgtaacatataacggtgaaaagctggattttcagaagttatatgatatagga
ataaagcagattccaagatttagaattctttatactgtttatgaagatctaagggagaag
gggtatgttgtaagatctgggattaaatatggagcagattttgctgtttatacagtaggt
cctggaatagaacatgctccttatcttttaatagctttagatgaaaattcagaaataact
tctaatgaaatattaggctttggtagagtttcacatagtacaagaaaagagttaatatta
ggtattgttaatttaaacactggtaagataagatacataatgtttaaatggttgaagatg
taa
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