Streptomyces kanamyceticus: CP970_10040
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Entry
CP970_10040 CDS
T06849
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ska
Streptomyces kanamyceticus
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ska03016
]
CP970_10040
Enzymes [BR:
ska01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP970_10040
Transfer RNA biogenesis [BR:
ska03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP970_10040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEU91179
UniProt:
A0A5J6G6S8
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All DBs
Position
2527075..2528352
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AA seq
425 aa
AA seq
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MTDAQETAADSSLRTTGGAPPADDGLAPEGLPIPLLEPRDGIPPVIADEESLATVVAAFA
AGTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVACPDLSGLGEAIGDTEWVLH
AATQDLPCLREIGMIPSRIFDTELAGRLAGFPRVGLGAMVESVLGYVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWAREEFDSIASAPPAPPRKDPWRRT
SGMHKVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLSDGAIVEAALALPPNVHALAALT
GFGHRMGRRQLEQWQAAVDRAKALADSELPQPGQAVSGPPPPRSWADRDPAAAARLSAAR
AAVSAVAEQVNMPQENLITPDTVRRVCWEPPAQVDAESVSAALSAHGARQWQISLVTPAL
VAALA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacagctcactgcgaaccaccggaggcgcccct
ccggccgacgacggcctcgctcccgaagggctgccgatccccctgctggagccgcgcgac
ggcattccgccggtgatcgccgacgaggaatccctcgccacggtggtcgccgcgttcgcc
gcgggcaccggacccgtcgccgtcgacgccgaacgcgcgtccggataccggtacggacag
cgcgcctatctcgtccagctgcgccgcgagggcgcgggcagcgcgctcatcgaccccgtc
gcctgccccgacctctccggcctcggcgaggccatcggcgacaccgagtgggtgctgcac
gcggcgacccaggacctgccgtgcctgcgcgaaataggcatgattccgtcgcggatcttc
gacacggagctcgcgggccgactcgccgggttcccgcgcgtgggactcggcgcgatggtc
gagagcgtcctcggctacgtactggagaagggccactccgccgtcgactggtcgacgcgg
ccgctgcccgagccctggctgcggtacgcggcgctcgacgtcgagctgctcgtggacctg
cgcgacgccctggagaaggagctcgaccggcaggggaagctggagtgggcccgcgaggag
ttcgactccatcgcctcggccccgcccgcgccgccccgcaaggacccctggcgtcgcacg
tccggcatgcacaaggtgcgtcggcgccgtcagatggcggtggtgcgggagctgtggacc
gcgcgcgacaaggtcgcccagcggcgtgacgtgtcccccggcaaggtgctcagcgacggc
gcgatcgtcgaggctgcgctcgccctgccgcccaacgtgcacgcgctcgccgcgctcacc
ggcttcgggcaccgcatggggcggcgccagctggagcagtggcaggccgcggtcgaccgc
gcgaaggcgctggccgactccgagctgccgcagcccgggcaggcggtgagcgggcccccg
ccgccccggtcctgggcggaccgggacccggcggccgcggcgcggctctccgcggcgcgg
gcggcggtctcggcggtcgccgagcaggtgaacatgccgcaggagaacctgatcactccg
gacacggtccgccgcgtctgctgggagccgccggctcaggtggacgcggagtccgtatcc
gcggccctctccgcacacggcgcccgccagtggcagatctccctggtgaccccggccctg
gttgcggccctcgcttga
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