KEGG   Streptomyces kanamyceticus: CP970_12395
Entry
CP970_12395       CDS       T06849                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ska  Streptomyces kanamyceticus
Brite
KEGG Orthology (KO) [BR:ska00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ska03032]
    CP970_12395
   03036 Chromosome and associated proteins [BR:ska03036]
    CP970_12395
   03400 DNA repair and recombination proteins [BR:ska03400]
    CP970_12395
DNA replication proteins [BR:ska03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CP970_12395
Chromosome and associated proteins [BR:ska03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CP970_12395
DNA repair and recombination proteins [BR:ska03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CP970_12395
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: QEU91578
UniProt: A0A5J6GCD8
LinkDB
Position
complement(3073114..3073815)
AA seq 233 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAVVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLTGGASATVKKA
AAKKASTAKKATATATKAAAKKTTAKKSAAKKTTATAKKAAAKKATAKKTATKATAKKAT
ATAKKTTAKKAAPAKKATAKKTAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq 702 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggttggcggccgtcagcaggcc
gccgacgccgtggacgcggtcctggacgccgtcgtccgtgccgtggtcagcggggaccgt
gtttcggtcaccggcttcggctcgttcgagaaggtcgaccgtccggcccgctacgcccgc
aacccccagaccggggagcgcgtgcgagtcaagaagacctcggttccgcgattccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtcgcg
gtcaagaaggcgcccaagggcagcctgaccggcggcgcttcggcgaccgtcaagaaggcc
gcggccaagaaggccagcaccgccaagaaggcgacggccacggcgacgaaggccgccgcc
aagaagaccaccgccaagaagtccgccgcgaagaagaccacggcgacggcgaagaaggcg
gccgcgaagaaggccaccgccaagaagacggcgacgaaggccacggccaagaaggccacg
gcgacggcgaagaagaccaccgccaagaaggccgcgcccgccaagaaggccaccgccaag
aagacggcgcccgccaagaaggccacggccaagaaggcgcccgccaagaagtcgacggcg
cgcaagacgaccgccaagaaggccacggcccgcaagaagtaa

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