Streptomyces kanamyceticus: CP970_14305
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Entry
CP970_14305 CDS
T06849
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ska
Streptomyces kanamyceticus
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ska03021
]
CP970_14305
Transcription machinery [BR:
ska03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP970_14305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
MarR_2
NirdL-like_HTH
MarR
IF2_N
Sigma70_ECF
HTH_3
HTH_Crp_2
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QEU91906
UniProt:
A0A5J6GFF1
LinkDB
All DBs
Position
3516626..3517657
Genome browser
AA seq
343 aa
AA seq
DB search
MRNGDGPVRDEERGTQGLPVGGREGTSRMTTGIPEQQAKPHPEDPGKPGPLAAADVSEQA
EPTAKDELRKLSGRGGGRRAGNMSEHEHGRHDPRDRSGARAMFIELRALKDGSREYAELR
NQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVV
GEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLE
GLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRIL
LLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacgggccggtgcgggacgaagagcgtggcacacaaggtctgcccgtc
ggcggcagggaggggacgtcccgtatgaccaccggaatccccgagcagcaggccaagccg
cacccggaggacccggggaagccgggtccgctggcagcggccgatgtgtcggagcaggca
gagccgaccgccaaggacgagctcaggaagctctccggccgaggcggcgggcgacgggcg
ggaaacatgagcgagcacgagcacggccggcacgatccacgggaccgcagcggcgcacgc
gcgatgttcatcgagttgcgcgccctgaaggacggcagtcgggagtacgcggagctgcgc
aatcagctggtccgcatgcacctgccgctcgtcgagcacctggcccgccgcttccgcaac
cgcggcgagccgctcgacgacctcacccaggtcgccacgatcggtctgatcaagtcggtg
gaccgcttcgacccggagcgcggcgtggagttctccacgtacgcgacgccgacggtcgtc
ggcgagatcaagcggcacttccgtgacaaggggtgggcggtccgcgtgccgcggcgtctg
caggagctgcggctcgcgctgacgacggcgaccgccgagctctcccagctgcacggccgc
tcacccaccgtgcacgagctcgcggagaaactggccatctccgaagaggaggtcctggag
ggcctggagtcggcgaacgcgtactccacgctgtccctggacgtccccgacacggacgac
gagtcaccggccgtcgcggacaccctgggcgccgaggacgaggccctggagggcgtcgag
taccgcgaatcgctcaagcccctcctggaagacctgccgccgcgcgagaagcgcatcctg
ctcctgcgcttcttcggcaacatgacgcagtcgcagatcgcccaggaagtcggcatctcc
cagatgcacgtctcgcgcctgctcgcgcgcacgctcgcacagctgcgcgagaagctcctc
gtcgaagagtga
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