Streptomyces kanamyceticus: CP970_17420
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Entry
CP970_17420 CDS
T06849
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ska
Streptomyces kanamyceticus
Pathway
ska03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP970_17420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ska03021
]
CP970_17420
03400 DNA repair and recombination proteins [BR:
ska03400
]
CP970_17420
Enzymes [BR:
ska01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP970_17420
Transcription machinery [BR:
ska03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP970_17420
DNA repair and recombination proteins [BR:
ska03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP970_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QEU92452
UniProt:
A0A5J6GDA8
LinkDB
All DBs
Position
complement(4184684..4188583)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQVENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSVAEAIMAFDAGELALQSTVDIRFPVGTIPPRGWVPPVAEEGEQEYQQGDSFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFFWAT
RSGVTVAISDVVVPEAKKAIVKGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLKIAVKG
EDGVLRKTENVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDALVANGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRIRIEETEKTKKIVVTPDDGSDETPFPISKRAKV
LVREGDHVEVGQKLTFGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cgacagtggtcgcacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacattgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctgggctacctcctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcactttcgtggac
gaggagcgccgcacccgcgacctgccctccctggaggcgcacgtctccgtggagcgccag
caggtcgagaaccgtcgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagacgagcaacagccccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgactccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgcttcaggaggccgtcgacgcg
ctcttcgacaacggccgtcgtggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaaccttctcggtaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgccgagcacccggttctcctgaaccgt
gcgccgacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtcacgatgccgacccaggac
atggtcctcggtctgttcttcctgaccaccgacggtgagctccgtgacaccaagggcgag
ggccgtgcgttcggctccgtcgccgaggcgatcatggcgttcgacgccggcgagctggcg
ctccagtcgacggtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggtg
ccgccggtcgccgaggagggcgagcaggagtaccagcagggcgacagcttccggctgcgt
acgtccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttcttctgggcgacc
cgctccggtgtcaccgtggccatctccgacgtcgtggtccccgaggccaagaaggcgatc
gtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacacaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagacgatcccgcgtccgatcaaggcctcgttccgcgagggcctctcg
gtccttgagtacttcatctccacgcacggtgcccgtaagggtctggcggacacggctctc
cgtaccgccgactccggttacctcacccgtcgtctggtcgacgtctctcaggacgtcatc
attcgcgaggaggactgtggcaccgagcgcggtctgaagctcaagatcgcggtcaagggc
gaggacggtgtgctccgcaagacggagaacgtcgagacctcggtgtacgcccgcatgctg
gccgaggacgtcgtcatcgacggcaaggtcatcgcgccggccaacgtcgacctcggtgac
gtcctcatcgacgccctggtcgccaacggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggccgttcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacgcagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggctcgtacgcccaagggtgtcgccccg
atctcggaggcggctggccgcatccgtatcgaggagaccgagaagaccaagaagatcgtc
gtcacgccggacgacggcagcgacgagactcccttcccgatctcgaagcgcgccaaggtc
ctcgtgcgtgagggtgaccacgtcgaggtgggccagaagctcaccttcggtgccaccaac
ccgcacgacgtgctgcggatcctcggtcagcgcgcggtccaggtccacctggtcggcgaa
gtccagaaggtctacaacagccagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtgacggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gagtcgtggctgtccgcggcttccttccaggagacgaccagggtcctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctttcccgctaccgcaacatccgggtcgagccgaccgaagag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
