Streptomyces kanamyceticus: CP970_21380
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Entry
CP970_21380 CDS
T06849
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ska
Streptomyces kanamyceticus
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ska03032
]
CP970_21380 (gyrB)
03400 DNA repair and recombination proteins [BR:
ska03400
]
CP970_21380 (gyrB)
Enzymes [BR:
ska01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP970_21380 (gyrB)
DNA replication proteins [BR:
ska03032
]
Prokaryotic type
DNA Topoisomerases
CP970_21380 (gyrB)
DNA repair and recombination proteins [BR:
ska03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP970_21380 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Se-cys_synth_N
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEU93128
UniProt:
A0A5J6GGZ0
LinkDB
All DBs
Position
complement(5024330..5026390)
Genome browser
AA seq
686 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTAAGENGEVTPSYDASAITVLEGLDAVRKRPGMYIGSTG
ERGLHHLVQEVVDNSVDEALAGHADTIDVTVLADGGVRVVDNGRGIPVDMHPVEKKPAVE
VVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKLSVEIKRDGYRWTQDYKLGVPTA
PLAKHEQVEESGTTVTFWADSDVFETTEYSFETLARRFQEMAFLNKGLTIKLTDERESAK
AVAGADTAEAADDEVRTVTYHYEGGIVDFVKYLNSRKGEVIHPTVIDVEAEDKERMLSAE
IAMQWNSQYTEGVYSFANTIHTHEGGTHEEGFRAALTGLVNRYARDKKLLREKDDNLTGE
DIREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLTDWFDRNPNEAADIIR
KGIQAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAK
SGRNPMYQAILPIRGKILNVEKARVDKILQNTEVQALISAFGTGVHEDFDIEKLRYHKII
LMADADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWSRDDFQYAYSDRERD
ALIELGRQAGKRVRDDSVQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDAAQADDLFS
VLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccaccgccgccggcgagaacggcgaggtcacaccctcgtacgacgccagcgcgatcacc
gtcctcgagggtttggacgcggtccgcaagcgacccggcatgtacatcggctcgaccggt
gagcgtggcctgcaccacctggtgcaggaagtcgtcgacaactccgtcgacgaggccctc
gccgggcacgcggacaccatcgacgtcacggtcctcgccgacggcggcgtacgcgtcgtc
gacaacggccgcggcatccccgtcgacatgcaccccgtggagaagaagcccgcggtcgag
gtcgtcctgaccgtcctgcacgcgggcggcaagttcggcggcggcggctacgccgtctcc
ggtggtctgcacggcgtcggtgtatcggtcgtgaacgcgctctccaccaagctctcggtc
gagatcaagcgcgacggctaccgctggacccaggactacaagctgggcgtgccgacggcc
ccgctcgccaagcacgagcaggtcgaggaatccggcaccacggtgaccttctgggccgac
tcggacgtcttcgagacgaccgagtactccttcgagacgctcgcgcggcgcttccaggag
atggcgttcctcaacaagggtttgaccatcaaactcactgatgagcgcgagtcggcgaag
gccgtggcgggtgcggacacggccgaggcggccgacgacgaggtccgcacggtgacgtac
cactacgaaggcggcatcgtcgacttcgtgaagtacctcaactcccgcaagggcgaggtc
atccaccccaccgtcatcgacgtcgaggccgaggacaaggagcgcatgctctcggccgag
atcgcgatgcagtggaactcgcagtacaccgagggcgtgtactccttcgcgaacaccatc
cacacgcacgagggcggtacgcacgaggagggcttcagggccgcgctgacgggcctggtc
aaccgctacgcgcgcgacaagaagctgctccgcgagaaggacgacaacctcacgggcgag
gacatccgcgagggtctgaccgcgatcatctcggtgaagctgggcgagccccagttcgag
ggccagaccaagaccaagctgggcaacaccgaggcgaagaccttcgtccagaaggtcgtg
cacgagcacctcacggactggttcgaccggaatccgaacgaggccgcggacatcatccgc
aagggcatccaggccgccacggcccgcgtcgccgcccgcaaggcgcgcgacctgacccgc
cgcaagggcctcctggagacggcgtccctgccgggcaagctctcggactgccagtcgaac
gacccgacgaagtgcgagatcttcatcgtcgagggtgactccgccggtggttcggcgaag
tccggccgcaatccgatgtaccaggcgatcctgcccatccgaggcaagatcctgaacgtc
gagaaggcgcgggtcgacaagatcctgcagaacaccgaggtccaggcgctgatctcggcg
ttcggcacgggtgtgcacgaggacttcgacatcgagaagctccgctatcacaagatcatc
ttgatggcggacgccgacgtcgacggtcagcacatcaacacgctgctcctgacgttcctg
ttccgcttcatgcggccgctggtcgaggcggggcacgtctacctgtcgcgcccgccgctc
tacaagatcaagtggagccgggacgacttccagtacgcctactcggaccgtgagcgcgac
gccctgatcgagctcggccgccaggcgggcaagcgcgtcagggacgactcggtccagcgc
ttcaagggtctcggtgagatgaacgccgaggagctgcgcgtcaccaccatggaccaggaa
caccgcgtgctcggccaggtcaccctggacgacgcggcgcaggccgacgacctcttctcg
gtgctgatgggagaggacgtcgaggcacggcgctcgttcatccagcgcaatgccaaggac
gttcgcttcctcgacatctga
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