Streptomyces kanamyceticus: CP970_22230
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Entry
CP970_22230 CDS
T06849
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ska
Streptomyces kanamyceticus
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ska03021
]
CP970_22230
Transcription machinery [BR:
ska03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP970_22230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_31
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QEU93281
UniProt:
A0A5J6GGZ5
LinkDB
All DBs
Position
complement(5201780..5202643)
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AA seq
287 aa
AA seq
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MSADQGSSKVLTLTLTKSPSESAPDALRSSTAPEAIDTRTLSRSLFLRLAALDQDSPERV
YVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMP
TVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQRLDRSPTVPELAAALGVSEED
VVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPR
ERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLSQLREGLIAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacactcacgctcaccaagagcccgagt
gaatccgcgcccgacgcgcttcgcagttcaacggccccggaagccatcgacaccaggacc
ctgtcccgctccctgttcctgcggctcgccgcactcgaccaggacagcccggagcgcgtc
tatgtacgcgacacgctcatcgagctcaacctcccgctcgtgcggtacgcggcggcccgc
ttccgcagccgcaacgaaccgatggaggacatcgtccaggtcggcacgatcggcctgatc
aaggcgatcgaccgtttcgactgcgaacggggcgtggagttcccgacgttcgcgatgccg
acggtcgtcggcgagatcaagcgcttcttccgggacaccagttggtcggtgcgcgtcccg
cgccgcctccaggagctgcgcctcgcactgacgaagaccagcgacgagctcgcccagcgg
ctcgaccgctcgccgaccgtccccgaactcgccgcggcgctcggcgtctcggaggaggac
gtcgtcgacgggctcgcggtgggcaacgcctacaccgcctcctcgctcgactcaccggcc
cccgaggacgacggcggcgagggctccctcgcggaccgcctcgggtacgaggacacggcc
ctggagggcgtggagtaccgcgagtccctcaagccgctgctcgccaagctgccgccgcgc
gagcgccgcatcatcatgctgcgcttcttcgccaacatgacgcagtcgcagatcggcgag
gaggtcggcatctcgcagatgcacgtctcccgcctcctcacgcggacgctgtcgcagctg
cgggagggtctgatcgcggactga
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