Streptomyces kanamyceticus: CP970_27880
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Entry
CP970_27880 CDS
T06849
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ska
Streptomyces kanamyceticus
Pathway
ska03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CP970_27880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ska03019
]
CP970_27880
03009 Ribosome biogenesis [BR:
ska03009
]
CP970_27880
Messenger RNA biogenesis [BR:
ska03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP970_27880
Ribosome biogenesis [BR:
ska03009
]
Eukaryotic type
Pre-60S particles
RNases
CP970_27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEU94213
UniProt:
A0A5J6GGH4
LinkDB
All DBs
Position
complement(6432691..6433293)
Genome browser
AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVR
TMHTASGLLDELPGGTTLADAEEQVLAYVREHVKEPRKAPLCGNSVGTDRGFLLRDMGTL
EEYLHYRIVDVSSIKELARRWYPRAYFNSPDKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKSIAAKHVLPAE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccgggctctcgctgacggatgac
gcacttatcgaggtggccgcactggtcaccgactcggaactgaacgtgctcggcgaaggg
gtggacatcgtgatccgcccgccggacgcggcgctggagaccatgcccgaggtggtgcgc
accatgcacaccgcctcgggtctcctcgacgagctgcccggcggaaccacgctggcggac
gccgaggagcaggtcctggcgtatgtacgtgagcacgtcaaggagccgcggaaggctccg
ctgtgcggaaactcggtcggcaccgaccgcggcttcctgctccgcgacatggggaccctg
gaggagtacctccactaccgcatcgtcgacgtctcctccatcaaggaactggcccggcgc
tggtacccgcgggcgtacttcaacagcccggacaagaacggcaaccaccgcgcgctcgcc
gacatccgcgagtccatcgccgagctccgctactaccgcgaggcgatcttcgtcccgcag
ccggggccggactcggacaccgcgaagtcgatcgcggcgaagcacgtcctgcctgcggag
tag
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