Sanguibacter keddieii: Sked_00200
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Entry
Sked_00200 CDS
T01214
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05364
penicillin-binding protein A
Organism
ske
Sanguibacter keddieii
Pathway
ske00550
Peptidoglycan biosynthesis
ske01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sked_00200
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ske01011
]
Sked_00200
Peptidoglycan biosynthesis and degradation proteins [BR:
ske01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Sked_00200
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACZ19997
UniProt:
D1BI23
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Position
complement(21855..23324)
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AA seq
489 aa
AA seq
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MNVPIRRVAVVALALFLILMGAATWIQFVQAPSLNADGRNSRSLYRELSIQRGPIVAGGQ
TIAESVPVDDAFKYQRVYSQPEMYAAVTGYYSFRFQSTGLERSANEYLAGTSDSLWWDRF
RNLVSGGSPQGSSVEVTIDPVVQQAAWDALGNQRGAVVALDPKTGAILALVSKPSYDPNL
VASHSAADASAAYQALADDSARPLDNRATAGRTYPPGSTFKLVTAAAALEDGTVTTEDQI
PAPDQLQLPQSSRMLNNFGGESCSPTGTMTLADALRISCNTAFAQLGMDLGPEALDDQAE
AFGFDSRMSVPLPVTPSHFPLEVDGQTIDDAQTALSAIGQYDVRVTPLQVAMVSAAIANG
GTLMQPYLIDRVRTPDLSVAVETDPEEIGTPISRSTADSLRDMMVGVVQDGTGTSAQIPG
VQVAGKSGTAETTADAAPHAWFTSFAPADDPQVVVAVIVENGGDAGNEATGGRVAAPIAR
AVMEAVINR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccccatccggcgcgtcgccgtcgtcgccctcgccctgttcctcatcctcatg
ggcgccgcgacgtggatccagttcgtccaggctccctcgctcaacgcggacggccgcaac
tcgcggtcgctgtaccgcgagctgagcatccagcgcggcccgatcgtcgccggtggccag
acgatcgccgagtccgtgcccgtcgacgacgccttcaagtaccagcgcgtgtactcccag
cccgagatgtacgcggccgtcaccggctactactcgttccggttccagtcgaccggtctc
gagcggtcggccaacgagtacctcgccgggacctccgactcgctctggtgggacaggttc
cgcaacctcgtgagcggcggctcaccgcagggttcctcggtcgaggtgaccatcgacccc
gtggtgcagcaggccgcgtgggacgcgctcggcaaccagcgcggagccgtggtcgccctc
gaccccaagacgggtgcgatcctcgccctggtctccaagccgtcctacgaccccaacctc
gtcgcctcgcactccgccgccgacgcgagcgccgcctaccaggcgctcgccgacgacagc
gcacggccgctcgacaaccgcgcgaccgccggccggacctacccgcccgggtcgaccttc
aagctggtcaccgccgccgcggcgctcgaggacgggaccgtgaccaccgaggaccagatc
ccggcgcccgaccagctccagctcccccagtcgagcaggatgctcaacaacttcggcggg
gagtcgtgctcgccgaccggcaccatgaccctcgccgacgccctgcgcatctcgtgcaac
accgccttcgcgcagctcggcatggacctcgggcccgaggccctcgacgaccaggccgag
gcgttcggcttcgactcccggatgtcggtcccgctcccggtcacccccagccacttcccg
ctcgaggtcgacggccagaccatcgacgacgcgcagaccgcgctctccgcgatcggccag
tacgacgtccgggtgaccccgctccaggtcgcgatggtgtcggcggcgatcgccaacggc
ggcacgctcatgcagccgtacctcatcgaccgggtccggacccctgacctctccgtcgcg
gtcgagaccgaccccgaggagatcgggacgcccatctcgcgctcgaccgccgactcgctc
cgcgacatgatggtcggggtcgtgcaggacgggaccgggacctcggcgcagatccccggc
gtgcaggtcgccgggaagtccgggaccgccgagacgaccgcggacgccgcgccccacgcc
tggttcacctccttcgcaccggcggacgacccgcaggtggtcgtcgcggtgatcgtcgag
aacggcggagacgccggcaacgaggcgaccggaggtcgcgtggcggccccgatcgcccgt
gcagtcatggaagcggtgatcaaccgatga
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