Sanguibacter keddieii: Sked_01260
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Entry
Sked_01260 CDS
T01214
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_01260
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sked_01260
Archaeal homologous recombinant proteins
Sked_01260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF7252
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ACZ20098
UniProt:
D1BIQ6
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Position
128253..129437
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AA seq
394 aa
AA seq
DB search
MRILHTSDWHLGRTLHGVDLLDHQAAYLDHLVELVRSESVDAVVVAGDVYDRAIPPVEAV
TLLSTALARLAEITQVVVTPGNHDSATRLGFGAELWREGVHVRARVADIGRPVELETTDG
APALVYALPYLDPDAARTVLREEDEPPLARSHEAVTGAAMRRVRADLAARGATVSARPRS
LVVAHAFVVGGEASESERDIRVGGVDTVPAAVLEGVDYVALGHLHGAQRVATGGGTVGRY
SGSPLAYSFSEMRQRKSTALVDLGPDGVVGEPQLVPAPVPRRLSEVSGSLDDLLGAAGEA
HVDDWVRVTVTDPARPREMNARLKARFPHVLAMAHRPPERSARESLTLAVTTASDPLVVA
ADFVAHVTGAQPDVRESAALRHAFETAAAAERSA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctctgactggcacctgggcaggaccctgcacggcgtcgacctc
ctcgaccaccaggccgcctacctcgaccacctcgtcgagctcgtgcgcagcgagtccgtc
gacgccgtggtggtggccggcgacgtgtacgaccgcgccatccccccggtcgaggccgtc
accttgctctcgaccgcgctcgcgcgcctcgccgagatcacccaggtggtggtgaccccc
gggaaccacgactcggcgacccgcctgggcttcggcgccgagctgtggcgcgagggagtc
cacgtccgggcgcgggtcgccgacatcggccgaccggtcgagctcgagacgaccgacggc
gcccctgccctcgtctacgccctgccgtacctcgaccctgacgcggctcgcactgtgctc
cgcgaggaggacgagccgccgctcgcccggtcgcacgaggccgtcaccggagccgcgatg
cgccgggtgcgcgccgacctcgccgctcgtggtgcgacggtgtcggcccgtccgcgctcg
ctcgtggtggcgcacgccttcgtcgtcggcggcgaggcctccgagtccgagcgggacatc
cgcgtcggcggcgtcgacaccgtgccggcagccgtcctcgagggtgtcgactacgtcgcc
ctcggccacctgcacggcgcgcagcgcgtcgcgacgggcggcgggaccgtaggccggtac
tccggctcgcccctcgcgtactcgttctccgagatgcggcagcgcaagtcgaccgccctc
gtcgacctcgggccggacggtgtcgtcggtgagcctcagctcgtccccgctcccgtaccc
cgccgcctcagcgaggtgagcgggtcgctcgacgacctgctcggcgcagctggcgaggcg
cacgtcgacgactgggtccgcgtcaccgtcaccgaccccgcgcgaccgcgtgaaatgaac
gcacggctcaaggcgcgcttcccgcacgtcctggccatggcgcaccgaccccctgagcgg
tccgcccgcgagtcgctcaccctcgccgtcacgacagcgagcgacccgctggtcgtcgcc
gcagacttcgtcgcgcacgtgaccggggcgcagcccgacgtccgcgagtcggcggcactc
cggcacgccttcgagacggccgccgcggcagagcggagcgcctga
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