Sanguibacter keddieii: Sked_05360
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Entry
Sked_05360 CDS
T01214
Name
(GenBank) fibronectin type 3 domain-containing protein
KO
K20276
large repetitive protein
Organism
ske
Sanguibacter keddieii
Pathway
ske02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sked_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
AGA-YXIM_GBD
fn3
Lipase_GDSL_2
Lipase_GDSL
GH85_C
FG-GAP_3
DUF4399
Motif
Other DBs
NCBI-ProteinID:
ACZ20496
UniProt:
D1BAE5
LinkDB
All DBs
Position
591885..597527
Genome browser
AA seq
1880 aa
AA seq
DB search
MQSNHPGGTPPRAGGPMTPRRHRSRTLRAAVAAAAAFSTALTAVVVATPSVAADASDEVV
ATQDATPAAPETDAAATPEAEDQPEGETAPAEPEEGATEPEADLPAPQPEVPEPEAPGTD
AVAPETTEDPDTTEVTAADDPVDPALAAPAWVRTARVTDTAATLRWDQVAGATGYVLTRA
DTPDGEQVEVGRTGERAFTLVDEAADTSVVGFYRVAATTAAGRSGFSAATATPVATPAEL
PEGGELRLDLGPGAVEDGWTALDATSAYTTESRIGFVDPAQVTSTDRGGDDALRSDFVTV
GDTELVVDLPAGDYTVSLVAGDSAGPTDISITAETIAKVQPTTRPAGETLEMSFDIALVD
GQLNLELGGTAANLAALTITRLPDRAPGSPTVFLTGDSTVQSYTSGYAPQAGWGQMLDRF
LDDEVTVDNHAIGGRSTKNFISQGRLDEVLRQITPGDHLVVQFGHNDNSYGVDDRYAGPA
DYAEYLRTFVEGAQQRGATPVVVTPVSRRAVDGDGRFTVSFPEYVQAATDLAADEGVALV
DLSRLSREYLDSIGAEAAKSVFLHVPAGVYPGRPAGTTDDTHFQEYGAIQLARLVAGAVA
DLDVPLAAHVLEVEPPAAVPAAPTGLVAGDVSNAGALLRWAPVEGADIYTVHRKAADATD
DAYALVGSSTLPQSAVTGLTEGTAYDFRVVAVNGRGDSEPSAPVRVTTSHALYRFDVQLA
GNPLMPGYTEVNEKSLYTPETGFGFLDVTGLGGRDRGVGFTPPPNDLQRDFLLPGPQHVF
ALDVPNGTYAVKTYNGDWIGTSRSNVVIEGKDYGASNAGAGGVSEKTSSPVLVTDGQLNI
QLTGTSSRLNGIEVTPLMLAPQQLVLDDLVVDGTTVTTSFSWEGVAAAATYRLYRQGANE
QVPVLVSDAAGTTGTDSGAAVGQVYTYTVTAVDAAGLESVASNALEVVTVDPDVTAPAVP
TGLALGAVGKNDVTLTWEAQDDAIAWSVYRSATADGDAVLLGTSTTPTFTDTTVLTTVPY
HYEVSAVNAGGESGRSARVASTADTVLVRQAEHLDRSPVAVAVDDGVYLGWRMLGLDPEE
IGFTVQRDGTTITPAPITTSTNYVDPDGTVDSVYTVTPVYAGLRSTPTAEFGVWADGSLD
IPLDKPADGYTKDGQPFTYSAGDTTVGDLDGDGEYELVVMWSPSNSKDNSQGGYTGEVLI
DAYRLDGTRLWRISMGPNIRAGAHYTQMMLFDLDSDGRAELMLKTADGTVDGVGTVIGDA
GADYRNSGGYVLDGPEFLTVFDGETGAAVDTVDYDPPRGDVGAWGDGYGNRVDRFLAGIA
YLDGEHPSAVFSRGYYTRTVIAAYDFDGTSISQRWVFDSDVAGRQYEGQGNHNLSVADVD
GDQKDEIVFGSMTIDDDGTVLYSTGLGHGDAMHVSDLDPSRPGLEVFAVHESAPSQQGIG
ATMRDAATGEVLWSMPATRDVGRGASGDIDPRYDGAESWAVTADGAWDSRDGEMRAADGT
VITDSIPAANFLTWWDGDLLREITDHDFTVETRTGVPTVSKWDWEAGQTVRLETFDGTRS
NNDTKGNPALQADLFGDWREELVYRTDDSTALRVFTTTDVTEHRLRTLMHDPVYRLGVAW
QNVSYNQPPHPSFFLGEGMETPAAPSITYTGVEGNGVVTEPTGPPVAADESALLPGLEDL
VTVPEGTYRPGDTVPVTLVDESRVGDWMSVWLRSEPVLLGDWQRVSAESGLDAVIPLDAE
PGTHRLVVQDGADEVVGWTALVVVADEEPGVDPGPGVDPGPGVDPGPGGDPDPGTDPAPG
TAPGAGPGAGGGAGGGGAVVDADGPDAGSSATGGSGPSALSATGAQVGAVVAAGVLLLLA
GAVLLVVRRRHGQAGHGDGA
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaaccaccccgggggcacacccccgagggccggcgggccgatgacgccccgc
cggcaccggagcaggaccctgagagcggcggtcgcggcagccgcggccttctcgacagcg
ctgaccgccgtcgtcgtcgcgaccccgtccgtcgccgctgacgcgtccgacgaggtcgtc
gccacgcaggacgcgacgcccgccgcgcccgagacagacgctgccgcgacccccgaggcc
gaggaccagcccgagggcgagacagcgccggctgaacctgaggagggagcgaccgagccc
gaggccgacctacccgcgcctcagcccgaggtaccggagcccgaggcccccggaaccgac
gctgtcgcccccgagaccaccgaggaccccgacaccacagaggtgaccgccgcagacgac
cccgtcgaccccgcgctcgcggccccggcctgggtccgcacggcgcgcgtcaccgacacg
gcggcgacgctccgctgggaccaggtcgccggtgccacgggctacgtcctgacccgtgcc
gacacccctgacggcgagcaggtcgaggtcggccggaccggcgagcgcgccttcaccctc
gtcgacgaggccgccgacacgtcggtggtgggcttctaccgggtcgccgcgaccacggcc
gccggccgctcgggcttctccgccgcgacggccacgcccgtcgccacccccgcggagctc
cccgagggcggcgagctgcggctcgacctcgggccgggggccgtcgaggacggctggacc
gccctcgacgccacctcggcgtacacgaccgagtcacgcatcggcttcgtcgaccccgcg
caggtgacgtccacggaccgcgggggcgacgacgccctgcggtccgacttcgtcaccgtg
ggcgacaccgagctggtcgtcgacctcccggccggggactacacggtctccctcgtcgcc
ggggacagcgccggacccacggacatctcgatcaccgccgagaccatcgccaaggtccag
ccgaccacccgcccagcgggcgagacgctcgagatgtccttcgacatcgcgctcgtcgac
ggccagctcaacctcgagctgggcggcaccgccgccaacctcgcggcgctgacgatcacc
cgcctgccggaccgagcacccgggtcgccgacggtgttcctcaccggcgactcgaccgtc
cagagctacacctcggggtacgccccgcaggccggctggggtcagatgctcgaccggttc
ctcgacgacgaggtcacggtcgacaaccacgcgatcggcggccgcagcaccaagaacttc
atcagccagggacgcctcgacgaggtcctccggcagatcaccccgggcgaccacctcgtg
gtccagttcggccacaacgacaactcctacggcgtcgacgaccgctacgcgggaccggcc
gactacgcggagtacctgcggaccttcgtcgagggcgcccagcagcgcggcgcgacgccc
gtcgtcgtgaccccggtctcgcgccgcgcggtcgacggcgacggccgcttcaccgtgtcg
ttccccgagtacgtccaggcggccacggacctcgcggccgacgagggcgtggccctcgtc
gacctgtcccggctgagccgggagtacctcgactcgatcggcgcggaggcggcgaagtcg
gtgttcctgcacgtgccggccggcgtctaccccggccgtccggcggggacgaccgacgac
acccacttccaggagtacggcgcgatccagctggcccggctcgtcgccggcgccgtggcg
gacctcgacgtcccgctcgcggcgcacgtcctcgaggtcgagccgcccgccgcggtcccg
gccgccccgaccggcctggtcgcgggcgacgtctcgaacgccggcgcgctgctgcgctgg
gcccccgtcgagggggccgacatctacaccgtgcaccgcaaggctgccgacgcgaccgac
gacgcctacgcgctcgtcggctcgtcgaccctcccgcagtctgcggtgacgggcctgacc
gagggcaccgcgtacgacttccgggtggtcgcggtcaacggtcgcggcgactcggagccg
tcggcacccgtgcgcgtcaccacctcgcacgcgctgtacaggttcgacgtgcagctcgcc
ggcaacccgctcatgcccggctacaccgaggtgaacgagaagtcgctctacacgcccgag
acgggcttcggcttcctcgacgtgaccggtctcggcggtcgtgaccgcggggtcggcttc
acgccgccgccgaacgacctccagcgggacttcctgctgcccggtccgcagcacgtcttc
gcgctcgacgtgccgaacggcacctacgccgtgaagacctacaacggtgactggatcggt
accagccgctccaacgtcgtcatcgagggcaaggactacggtgcgtcgaacgcgggcgcc
ggcggggtctccgagaagacctcgtcgccggtgctcgtcaccgacggccagctgaacatc
cagctcaccgggacgtcgtcgcggctcaacggcatcgaggtcaccccgctgatgctcgcg
ccgcagcagctggtcctcgacgacctcgtggtcgacggcaccacggtgaccaccagcttc
tcgtgggagggcgtcgctgccgcggcgacctaccggctgtaccgccagggcgccaacgag
caggtcccggtcctcgtctccgacgcggcaggcaccaccgggaccgactcgggtgccgcc
gtcggccaggtgtacacgtacaccgtgaccgccgtcgacgcggcaggcctcgagtccgtg
gcgtccaacgcgctcgaggtcgtcacggtcgaccccgacgtcacggcacccgccgtgccg
acaggcctggcgctcggtgccgtcggcaagaacgacgtgaccctcacctgggaagcgcag
gacgacgcgatcgcctggtcggtctaccgctcggcgaccgccgacggcgacgccgtgctc
ctcggcacgtcgaccacgcccaccttcaccgacaccacggtcctcacgaccgtgccgtac
cactacgaggtgagcgcggtgaacgccggcggcgagtccggtcgctccgcacgcgtcgcc
tcgaccgccgacaccgtcctggtccgccaggccgagcacctcgaccggtcgcccgtcgcg
gtcgccgtcgacgacggcgtctacctcgggtggcgcatgctgggcctcgaccccgaggag
atcggcttcaccgtccagcgcgacggcacgacgatcaccccggcgccgatcaccacgagc
accaactacgtcgaccccgacgggaccgtcgactcggtgtacaccgtcacccccgtctac
gcgggcctgcgctcgacgcccacggccgagttcggcgtgtgggccgacggctcgctcgac
atcccgctcgacaagcccgccgacggctacaccaaggacggccagcccttcacgtactcg
gccggcgacaccaccgtcggggacctcgacggcgacggcgagtacgagctcgtcgtcatg
tggtcgccgagcaacagcaaggacaactcgcagggtggctacaccggcgaggtgctgatc
gacgcgtaccgcctcgacgggacgcgcctgtggcgcatctcgatggggccgaacatccgc
gccggggcgcactacacgcagatgatgctgttcgacctcgactccgacggtcgcgccgag
ctcatgctcaagacggccgacggcacggtcgacggcgtgggcacggtcatcggcgacgcc
ggggccgactaccggaactcgggcgggtacgtcctcgacggacccgagttcctcaccgtg
ttcgacggggagaccggcgccgccgtggacaccgtcgactacgacccgccgcgcggtgac
gtgggtgcttggggcgacggctacggcaaccgtgtcgaccggttcctcgcgggcatcgcc
tacctcgacggcgagcacccgagcgcggtcttcagccgcggctactacacccgcaccgtg
atcgccgcctacgacttcgacggcacgtcgatctcgcagcggtgggtgttcgactcggac
gtcgcagggcgccagtacgagggccagggcaaccacaacctgtccgtggccgacgtcgac
ggcgaccagaaggacgagatcgtcttcgggtccatgaccatcgacgacgacggcaccgtc
ctctactcgaccggtctgggccacggcgacgccatgcacgtgtcggacctcgacccctcg
cggcccggcctcgaggtgttcgccgtgcacgagtctgctccctcgcagcagggcatcggt
gcgaccatgcgcgacgccgccaccggcgaggtgctgtggtcgatgccggccacccgcgac
gtcggacgtggtgcctcgggcgacatcgacccgcggtacgacggtgccgagtcgtgggcc
gtcacggccgacggcgcgtgggacagccgggacggcgagatgcgcgccgccgacggcacg
gtcatcaccgacagcatccctgcggcgaacttcctcacgtggtgggacggcgacctcctc
cgggagatcaccgaccacgacttcacggtcgagacccgcaccggtgtcccgacggtgtcg
aagtgggactgggaggccggtcagaccgtccgcctcgagaccttcgacgggacccggtcg
aacaacgacaccaaggggaaccccgccctccaggccgacctgttcggcgactggcgcgag
gagctcgtgtaccgcacggacgactcgacggcgctgcgcgtcttcaccacgacggacgtc
acggagcaccgcctgcgcacgctcatgcacgacccggtctaccggctcggcgtggcgtgg
cagaacgtctcgtacaaccagccgccgcacccctcgttcttcctcggggagggcatggag
acgccagctgcaccgtcgatcacgtacaccggggtcgaggggaacggcgtcgtgacggag
ccgaccggtccgccggtcgccgccgacgagtccgcgctgctgcccgggctcgaggacctg
gtgaccgtcccggagggcacctaccgcccgggcgacaccgtcccggtgacgctcgtcgac
gagagccgcgtcggcgactggatgtcggtgtggctgcgctccgagcccgtgctgctgggt
gactggcagcgcgtctcggccgagagcggcctcgacgcggtcatcccgctcgacgccgag
ccgggcacgcaccgcctcgtggtgcaggacggcgctgacgaggtggtcggctggaccgcg
ctcgtcgtggtcgccgacgaggagccgggcgtcgacccgggcccgggtgtggaccccggt
cccggcgtggaccccggtcccgggggagaccccgacccgggcacggaccctgctcccggg
accgccccgggcgctggtcccggtgccggcggcggcgctgggggtgggggtgccgtcgtc
gacgccgacggccctgacgccggctcctccgccaccggtggctccgggccgtcggcgctg
agcgcgaccggcgcccaggtcggcgccgtggtcgcggcgggcgtgctcctgctgctcgcc
ggcgcggtgctgctcgtggtgcgacgccgccacggccaggcaggccacggcgacggggcc
tga
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