Sanguibacter keddieii: Sked_06390
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Entry
Sked_06390 CDS
T01214
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ske
Sanguibacter keddieii
Pathway
ske02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sked_06390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ske02000
]
Sked_06390
Transporters [BR:
ske02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Sked_06390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
LPD26
DUF6637
Motif
Other DBs
NCBI-ProteinID:
ACZ20599
UniProt:
D1BAP8
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All DBs
Position
723597..725255
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AA seq
552 aa
AA seq
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MTDGTRRTRKRLTSALGLGLVAALALSACAAPESTGGGTAGSSSLMLAADNGSPTFTRNF
NPFVIEKRTMSLIINEPLMVVNALDGKSTNFLQSDYTQPDAKTIVSTLREGVTWSDGEDF
TADDVVFTYNLLKEFPALDTTGIWSRVESVTAEGQDVTFTLKSEDSSAPIIVLAVPIVPE
HVWADQADPVTFTNENPVGTGPYVLGDFNANQYKMEKNETYWQADKVAAEELVLPAANSQ
LDVVNNGYDWAYAFMSDVENTWNAADEGNEYWFPAGGTVGIAPNLTKAPYDDVNFRRGMS
LALERGIIAENASEGTVGAAGQQGLLLPTQEEWLTDAIPDEGMVTQDTAAAEAAFAEAGY
TLEGGKLVDAEGNQATMTITTPNGWTDWLRAVQEIQKQYMAIGIDVKVNQPQPAAYFKAV
QDGDFDVAMTSFGGNGSVYQGYYNLLSSDFNRPLGETAPSNYQRYSNPDVDALLTEFRTT
VDEDRQKELAGELQEVMYNDVPVVSVYYAGLWGLFSDKSFTGWPDAENPYMTPTPYAASA
LVVLTTITKADG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcacccgtcggacgcgcaagcgcctgacctccgcgctcgggctgggcctc
gtagcggccctcgctctcagcgcctgtgcggcaccggagtccaccggaggcggcaccgcc
ggctccagctcgctgatgctcgcggccgacaacggctcgccgaccttcacgcgcaacttc
aacccgttcgtgatcgagaagcgcaccatgtcgctcatcatcaacgagcccctcatggtc
gtgaacgcgctcgacggcaagtccaccaacttcctgcagagcgactacacgcagcctgac
gcgaagacgatcgtctcgaccctccgtgagggcgtgacgtggagcgacggcgaggacttc
accgccgacgacgtcgtcttcacctacaacctcctcaaggagttcccggctctcgacacc
accggcatctggtcgcgcgtcgagtccgtcaccgctgagggccaggacgtcacgttcacc
ctgaagtccgaggactcgtccgcgccgatcatcgtgctcgccgtcccgatcgtccccgag
cacgtctgggcagaccaggccgacccggtcaccttcaccaacgagaaccccgtgggcacc
ggcccctacgtgctgggcgacttcaacgccaaccagtacaagatggagaagaacgagacc
tactggcaggccgacaaggtcgctgccgaagagctcgtcctccccgccgcgaactcgcag
ctggacgtcgtcaacaacggctacgactgggcctacgcgttcatgtccgacgtcgagaac
acctggaacgccgcggacgagggcaacgagtactggttccccgccggtggcaccgtcggc
atcgcgccgaacctcaccaaggccccctacgacgacgtcaacttccgtcggggcatgtcg
ctcgcgctcgagcgcggcatcatcgccgagaacgcctcggagggcacggtcggcgctgcg
ggccagcagggtctgctgctcccgacgcaggaggagtggctcaccgacgccatccccgac
gagggcatggtcacccaggacaccgccgccgccgaggcggccttcgccgaggccggctac
accctcgagggcggcaagctcgtcgacgccgagggcaaccaggcgacgatgaccatcacc
acgccgaacggctggaccgactggctccgcgccgtgcaggagatccagaagcagtacatg
gccatcggcatcgacgtgaaggtcaaccagccgcagcctgccgcgtacttcaaggcggtc
caggacggcgacttcgacgtcgcgatgacgtccttcggtggcaacggctcggtctaccag
ggctactacaacctgctgagctcggacttcaaccgtccgctcggggagaccgcgccctcc
aactaccagcggtactccaaccctgacgtcgacgctctcctcaccgagttccgcacgacc
gtcgacgaggaccgccagaaggagctcgccggcgagctccaggaggtcatgtacaacgac
gtcccggtcgtctcggtctactacgcaggactctggggtctcttctccgacaagagcttc
acgggctggccggacgccgagaacccgtacatgaccccgacgccgtacgcagcatcggcg
ctcgtcgtcctcaccaccatcacgaaggctgacggctga
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