Sanguibacter keddieii: Sked_06880
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Entry
Sked_06880 CDS
T01214
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_06880
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sked_06880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
AAA
AAA_22
DUF7125
AAA_30
Lon_C
AAA_19
AAA_24
CbiA
RecA
nSTAND3
AAA_5
NTPase_1
AAA_14
ABC_tran
NACHT
Rad51
IstB_IS21
AAA_29
Isochorismatase
RsgA_GTPase
MCM
DAP3
MMR_HSR1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ACZ20648
UniProt:
D1BB82
LinkDB
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Position
complement(787906..789327)
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AA seq
473 aa
AA seq
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MATTSTRSSSAASRATRPGYRCTECGWTTSKWVGRCGECQEWGSVTEAAAAASGPKTVAS
APTRSVAQPIGEIDVDSAQAAPTGISEFDRVLGGGIVPGAVVLLAGEPGVGKSTLLLDVA
STTARAGRRVLYITGEESAGQVRLRAERIDALAPTLLLAAETDLGQVLGQIEATDPDLLI
VDSVQTVASAQVDGSPGGVGQVREVASALIAAAKGRNMPVVLVGHVTKDGAVAGPRTLEH
LVDVVLQFEGDRHSRLRMVRAVKNRYGPTDEVGCFELTEDGIAGLADPSGLFLSHINLAV
PGTCVTVTLEGRRPLALEIQSLVVASPLANPRRTTSGIDSSRLAMILAVIHRHLGARLTD
ADVYVSTIGGARVTEPAADLAIALATLSALENKPVPVGTIAIGEVGLAGELRAVSGISRR
LSEAARLGFTRAVVPPGTSGPAPAGMTLLPAANLAEAVQRTQQNLTPTPRPDA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccagcacacggagctcctccgccgcgtcccgagcgacccgtccggggtac
cgctgcaccgagtgcggctggaccacctcgaagtgggtcgggcggtgcggcgagtgccag
gagtggggctcggtgaccgaggccgccgcggctgcctccggccccaagacggtcgcctcc
gccccgacccggtcggtcgcccagccgatcggcgagatcgacgtggactccgcccaggct
gctccgacggggatcagcgagttcgaccgcgtcctcgggggcggcatcgtccccggtgcc
gtggtgctgctcgccggcgagccgggcgtcggcaagtcgacactgctgctcgacgtcgcg
agcaccacggcgcgcgccggacgccgggtcctgtacatcaccggtgaggagtcggccggg
caggtgcggctgcgggccgagcgcatcgacgccctcgcccccacgctgctgctcgccgcg
gagacggacctcgggcaggtcctcgggcagatcgaggcgaccgaccccgacctgctgatc
gtcgactccgtccagaccgtcgcgtccgcccaggtggacgggtcccccgggggcgtcggg
caggtccgtgaggtcgcgtcggcgctcatcgccgcggccaagggtcggaacatgcccgtg
gtcctcgtggggcacgtgaccaaggacggtgccgtggccggcccccggacgctcgagcac
ctcgtcgacgtggtcctccagttcgagggcgaccgccactcccggctgcgcatggtccgt
gccgtgaagaaccgctacgggccgaccgacgaggtcggctgcttcgagctcaccgaggac
ggcatcgccggtctcgccgacccgagcgggctgttcctctcccacatcaacctcgcggtg
ccgggcacctgcgtgaccgtgacgctcgagggccgacggcctctcgcgctcgagatccag
tcgctcgtggtcgcgagccccctcgcgaacccccgccgcaccaccagcggcatcgactcg
agccgtctcgcgatgatcctcgccgtaatccaccgtcacctcggcgcgcggctcaccgac
gccgacgtctacgtgtcgaccatcgggggcgcgcgggtcaccgagcccgcggcagacctc
gcgatcgcgctcgccacgctgagcgccctcgagaacaagcccgtccccgtcgggaccatc
gcgatcggggaggtgggcctcgccggagagctgcgcgcggtgtccgggatctcgcgccgg
ctcagcgaggcggcgcgcctgggcttcacccgtgcggtcgtcccgccgggcacctcggga
ccagcccctgcgggcatgacgctgctgcccgcggccaacctcgccgaagcagtccaacgc
acccagcagaacctcacgccgacgccccgccctgacgcgtag
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