Sanguibacter keddieii: Sked_09240
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Entry
Sked_09240 CDS
T01214
Name
(GenBank) conserved repeat protein
KO
K20276
large repetitive protein
Organism
ske
Sanguibacter keddieii
Pathway
ske02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sked_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
DUF11
DUF7617
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
ACZ20874
UniProt:
D1BCM6
LinkDB
All DBs
Position
1056603..1065341
Genome browser
AA seq
2912 aa
AA seq
DB search
MSAPLHPSSSTARHRRPGKASRHLWRAGLQRTAAVVAVFALAATTVLGGIALAPSSEAAA
LTPAVTLAPSADGAKGMLAGESETVTLTVANPSADPWYNLSVTLTVPTGVAFVSASGLGT
PRVYPAGSRLPDRTLVPAGQDLWVWQDVSDLPSTASRSFEVVVDPAQPAAGTGETDDTTV
FPVGSTVDLVARAWTSTDARYVPVFPGGTSRGAAPAVAATLAGDAAPSSTLVQAIRVTKD
EPSPESELLRGVHDRTTEYTITVKNTSEGPTTGAVVTDFLPAGLEFLGCGAMDNTTGARE
EYAGSGDLAATPVVADCLPASTVTTLEKTAGTAAEFPADLPDGVYTRVTWGPLDLAADQA
LPIVYAAGIPQRMNTMTWTDGPGPDGLGATGQAANLDNNTGASTRHSAGDPAATDGDVYR
NVVTVDGTYAGVVRTGTDRATTDQDDEVVFSMDLRVLKSVDTRPVDASPTPFGGGSSSEF
FTGAVAKYTLDLRTSEYADASDITLVDIIPNGLCPVLPAGTTVRSGPVEIPRTDGSSESF
TAAEAEDLPADCVPGSTSGSGSWSAPAVTGAVVDWVAYDAVLGRFVLSLSAPDMTGAVDS
HAVVYPVLMRGSYTGNEGTTSSLDDFVNTVVMTATTTGLAGDEAGVTATVADDSSARIVA
GPSSISKKVLPRAVDVSAGCPADPSLYVEGDDPAASGGLSFVLGDTVCYELTVSFAPDAD
TRNPVVTDMLPEGVDYVGTTTTLFDGATEIPGVTWNETVNGSTLSWKPSTRVAGNGDRLV
PLGSRLVIHVAGTVTGVSEDAAQLDKPENLMKYQQENVRGELFFERDQAAILVEAGLQLV
KGVRDVDGDATRPATSEALPDGALVGSDRDGIEVAEGDAITYRVDLTGAREDILGISVED
RLPDGIAAADVSAVSDAGVVETRPDGVFVVWTGLTLPAGTEAAPTAKTLTYVVTVPAETP
VTTRLENTASILAYQFLTNAGTPGPVAVPGEDGVSTLGTSDTSDVSLPDVTVAKTVVTTG
IEGENNNISGTPVPPATALPQAVHGEYVVYEYAVTVPARTTVLDGVLEDAGVLEAATGSG
PYTVDATQSFWLLDGATQPAGFAFDDATGRLEFPAVYDNTTTADQVFTVQVTVWTTGRTT
PTAARWAYGDVLQNTATFTSASSTHDATADVEYVVAEPTLTKTVDDGDLPVVAGQVLTYT
LTATNTTGRPTSFDTVVTDCVPAALVDVVPGTPTRGTVAPLGTCADGETQIVWTIGDVPA
GQTYTLTYTAEVSPAAAGGASYTNTAGLVGYTLPGVDPTDARQLELTSTADATVTVQDAS
IVKTVDAPSGSIGDTRSFAVTVTLPKNVNFYSPTITDAVPTGLRVVPGSIAVSAVDSGVT
FSCTPASGSGTDGGDVVCEASDDILSAPDDRTVTLTYDATIVQDAARTAPARASVLTNVA
SFAWAATAGATDTTSVEDEATVTVTEPGLTIKKYVEGQDAQDAATAVTAAPSSTVSYSVV
VTNPATVGGATAYDVVVTDSIPAGLVDVTLPGTMPAGVLGTVSGGLVTWTIESLAPGATL
TLDLTATLEPSAALRSGTTITNTAELAEYWSTPGSGGVEDAAHRQYVGGSDPAVVLPEFP
FVTVQKAAGGSPTARVGTPFPWTLTLTNSGNGLAQTVTATDTLPAGWGTPVVTGVTRNGA
AMADADWDFDPDAVRWTFADVAPADVIVVGYTSTPTADAYEAPAAGVGPSATGPLNAHTN
TVSLTATDSTGEAQNGEGDYVGDDDSADAFLAATEVSILKERVGTGDVRTGEDVAFTLTA
STVGLQAAADVVVEDTLPAGLTFAGVDTPFTADPALWSCTVTDETLRCAALDDLAAGDSL
SVTVTARAVAPPVGTLSQQVTNTATVTTSTPETGTGSTTDDETITVRAVPSIAIDKRADV
APAGDPVRAVVAGGDDDTQYVLDGQDPERVAHFAITVSNTGPVTLVDVEVEDLAAAQCAG
VTIPDLAPAGEDGDSYTFTCEGPAPDASGYTNVAVATATTALGDDVDATDSSRVELSALS
IDKTGSIAAVAPVPGDLATFVFEVRNTGSATLTDVTVDDPLDGLSALTFGAWPGDEGTLL
PGDVVQATATYPLTREDIDAGGVTNSATASGTDPAGQAPTGEDTVTVTPGSSPSILLVKT
GTLATEPDVATVAGDVVTYLFTVTNDGNVTLRDVAISDPLPGLDDLVYDWSAALGEGVLQ
PGETVTATAGYALTQADVDAGRVDNRAIASGEAPDGTSVDDADTWLVQVDPQPLVDLVKS
GELGPDTTGRAGDLVVYTFTVTNPGSVTLTDVEVTDLLDGLSSISYAWPGTAGTLAPGDE
LVATATYPLTQEDVDRGSVDNTASVVGTPPTGDDVEADDTETVVVPPQPTIALVKKGALA
AGSQGLLGDTVEYTLTATNTGNVTLRDLSIEDVDLPGLAPLTLGTWPGDEGVLAPGESVS
ATTSYVLVQADVERGYVDNLATTAGISPFGSPVDGEDLERVVTLQTPSIVLEKSAALADG
QTGVVGDAVDFTFSARNDGNVTLTGVVIADELPGLSEISLVWPGAVGVLLPGEEVTGTAG
YVVTQQDVDAGAVVNTAEATGTSPAGVEVTDPAEASVLLPQAPAVDLVKTAALADGATGV
AGETVTYSFTVTNTGDVTLRGVRVTDRLPGLSEVVFGAWPGADGELAPGASVDASATYVL
TQEDVDRGSVTNVAVATGTPQVGPPVSDDDTATVPTDPRAGISLVKTAALAPGAAGAVGD
TVTFTFEVTSRGTATLTSVAVTDALPGLSELTYGSWPAAEGTLAPGESVTATATLVLTQE
HVDAGSVRNLATVSGVSPSGGVVSATDEVTLAVPGTPVPPADGADPSVADPAPSGPGTLP
WTGAAVTGLAVLAAALLVAGLLLVRRRQATRP
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccgctgcacccctcgagctcgaccgcgcgtcaccgacgccccggcaaggcc
tcgcgccacctctggcgcgccggcctccagcggacggctgccgtcgtggcggtcttcgcc
ctcgcagccacgacggtcctgggcggcatcgccctcgcgccgtcctccgaggcagcggcg
ctgacgcctgcggtcaccctcgccccgtcggccgacggagccaagggcatgctcgcgggg
gagagcgagaccgtgacgctcaccgtcgcgaacccctcggcagacccctggtacaacctc
tccgtgacgctcaccgtcccgacgggcgtcgccttcgtctctgcctccgggctcgggaca
ccgcgggtctaccccgcggggtcacgcctgcccgaccggacgctcgtgccggcaggtcag
gacctctgggtgtggcaggacgtctccgacctcccgtcgaccgccagccgcagcttcgag
gtggtcgtcgaccccgcgcagcccgccgcagggacgggcgagaccgacgacaccacggtg
ttccccgtcggctcgacggtggacctcgtggcacgcgcctggacgagcaccgacgcccgg
tacgtgccggtcttccccggcggcaccagccgtggcgcggcgccggccgtggccgcgacc
ctcgcgggcgacgccgcgccctcgagcaccctcgtccaggccatccgggtgaccaaggac
gagcccagccccgagtccgagctgctgcgcggcgtgcacgaccgcaccaccgagtacacg
atcaccgtgaagaacacgagcgagggcccgaccaccggcgccgtcgtcaccgacttcctc
cccgccggcctggagttcctcggctgcggggccatggacaacaccacgggcgcccgcgag
gagtacgccggctcgggagacctcgccgcgacccccgtggtcgccgactgcctccccgcg
tcgaccgtgaccaccctcgagaagaccgcgggcaccgccgccgagttcccggccgacctg
cccgacggcgtctacacccgcgtgacctggggcccgctcgacctcgccgccgaccaggct
ctcccgatcgtctacgcagcgggcatcccgcagcggatgaacaccatgacctggacggac
ggcccgggcccggacggcctcggcgcgaccggccaggcggccaacctcgacaacaacacc
ggcgcctccacgcgccacagcgcgggcgaccccgcagcgaccgacggcgacgtctaccgg
aacgtcgtgaccgtcgacggcacctacgccggcgtcgtgcgcaccggcacggaccgggcc
acgaccgaccaggacgacgaggtcgtcttctcgatggacctgcgcgtcctcaagtccgtc
gacacgcgccccgtcgacgcctcgccgacgcccttcggcggcggcagctcgagcgagttc
ttcacgggggccgtcgccaagtacaccctcgacctgcggaccagcgagtacgccgacgcg
tcggacatcacgctcgtcgacatcatccccaacggcctctgcccggtcctcccggcaggc
accacggtccgctccggcccggtcgagatcccgaggaccgacggctcgagcgagtccttc
accgccgccgaggccgaggacctgcccgccgactgcgtcccgggcagcaccagcggttcg
ggttcctggtctgccccggccgtcaccggcgcggtcgtcgactgggtcgcctacgacgcc
gtgctgggccggttcgtgctgtcgctcagcgctccggacatgaccggtgcggtcgacagc
cacgccgtcgtgtaccccgtgctcatgcgcggcagctacaccggcaacgagggcaccacc
tcctccctcgacgacttcgtcaacacggtcgtcatgaccgctaccaccaccggcctggcc
ggtgacgaggccggcgtcaccgcgacggtcgccgacgactcgtccgcgcgcatcgtcgcc
ggcccgagcagcatcagcaagaaggtcctgccgcgcgccgtcgacgtctcggcgggctgc
ccggcggacccgtcgctctacgtcgagggggacgacccggcagcctccggtggcctgagc
ttcgtcctcggcgacacggtctgctacgagctcaccgtgagcttcgcccccgacgccgac
acccggaaccccgtcgtcaccgacatgctgcccgagggcgtcgactacgtcggtacgacc
accacgctgttcgacggcgccacggagatccccggggtcacctggaacgagaccgtcaac
ggcagcacgctgtcctggaagccgtcgacccgcgtcgcgggcaacggcgaccgcctggtg
ccgctcggctcccgcctggtgatccacgtggccgggaccgtcaccggcgtgtccgaggac
gcggcgcagctcgacaagcccgagaacctcatgaagtaccagcaggagaacgtccgcggc
gagctgttcttcgagcgcgaccaggccgcgatcctcgtcgaggccggcctgcagctggtc
aagggcgtccgcgacgtcgacggcgacgcgacgcgccccgccacgtccgaggcgcttccc
gacggcgccctcgtcgggtccgaccgcgacggcatcgaggtcgccgagggcgacgcgatc
acctaccgggtcgacctcaccggcgcgcgcgaggacatcctggggatctccgtcgaggac
aggctgcccgacgggatcgcggccgccgacgtctcggcggtctccgacgccggggtggtc
gagacccgtcccgacggggtcttcgtcgtgtggaccggtctcactctgcccgcgggcacg
gaggctgcgcccaccgcgaagacgctcacctacgtggtgaccgtccccgccgagacaccg
gtcacgacccggctcgagaacaccgcctcgatcctcgcgtaccagttcctcacgaacgcc
gggactcccggcccggtcgccgtccccggcgaggacggtgtctcgacgctcgggacctcc
gacacctcggacgtgtccctgcccgacgtgaccgtcgcgaagacggtcgtcaccaccggg
atcgagggcgagaacaacaacatcagcgggacgcctgtcccgcctgccaccgcgctgccg
caggcggtgcacggtgagtacgtggtctacgagtacgcggtcaccgtcccggcacgcacc
accgtgctcgacggcgtcctcgaggacgccggtgtcctcgaggctgccaccggcagcggg
ccgtacacggtcgacgcgacgcagagcttctggctgctcgacggcgccacgcagccggcc
ggcttcgccttcgacgacgccaccggacggctcgagttccccgcggtctacgacaacacc
acgaccgccgaccaggtcttcaccgtccaggtcaccgtctggacgacgggccggaccacc
ccgaccgccgcccgctgggcgtacggtgacgtgctgcagaacaccgcgaccttcaccagc
gccagctcgacccacgacgcgacggccgacgtcgagtacgtcgtcgccgagccgacgctc
accaagaccgtcgacgacggcgacctcccggtcgtcgccggccaggtcctcacctacacg
ctgaccgccacgaacacgacgggccgtccgacctccttcgacaccgtcgtcaccgactgc
gtgccggcggcgctcgtcgacgtggtccccgggacgccgacgcgcggcaccgtggccccc
ctcggcacctgcgcggacggcgagacgcagatcgtctggaccatcggggacgtccccgcc
ggccagacgtacacgctcacctacacggccgaggtctcgccggcggcggccggcggtgcc
agctacaccaacacggcgggactcgtgggctacacgctccccggcgtcgacccgaccgac
gcgcgtcagctcgagctgaccagcaccgcggacgccacggtcacggtccaggacgcgagc
atcgtcaagaccgtcgacgcgccctccggcagcatcggtgacacccgcagcttcgcggtg
acggtcaccctgcccaagaacgtcaacttctactccccgacgatcaccgacgccgtcccg
accgggctgcgcgtcgtccccgggtcgatcgccgtcagcgcggtcgactccggggtgacc
ttctcctgcacccctgcctccgggtcgggcaccgacggcggcgacgtcgtctgcgaggcc
tcggacgacatcctgtccgcccctgacgaccggaccgtcaccctcacctacgacgcgacg
atcgtccaggacgccgctcggaccgccccggcccgcgcgtcggtgctgaccaacgtggcg
agcttcgcgtgggccgcgacggccggcgccaccgacacgacctcggtcgaggacgaggcg
acggtcaccgtcaccgagcccggcctgaccatcaagaagtacgtcgagggccaggacgcc
caggacgcggcgaccgcggtcacggccgcgccgtcgagcaccgtgagctactccgtcgtc
gtgacgaaccccgcgacggtcggaggtgccaccgcctacgacgtcgtggtgaccgacagc
atccctgcggggctcgtcgacgtcaccctcccgggcacgatgcccgccggtgtcctgggg
accgtctcgggcggcctggtcacctggaccatcgagtccctcgcccccggggcgaccctc
acgctcgacctcaccgcgaccctcgagccctctgcggcgctgcggtccggcacgacgatc
accaacacggcagagctcgccgagtactggtcgacgcccggctcgggcggcgtcgaggac
gcggcgcaccgccagtacgtcggagggtccgacccggcggtcgtgctcccggagttcccc
ttcgtcaccgtgcagaaggcagccgggggcagccccaccgcgcgtgtcggcacgccgttc
ccgtggaccctcaccctgacgaactccggcaacgggctcgcgcagaccgtgacggccacg
gacacgctgcccgcgggctggggcacgccggtcgtcaccggggtgacccggaacggggct
gcgatggctgacgccgactgggacttcgacccggacgccgtgcgctggaccttcgccgac
gtcgctcccgccgacgtgatcgtggtgggctacacctcgacgccgacggccgacgcctac
gaggcccccgcggccggtgtcgggccgagcgcgaccggtccgctgaacgcccacaccaac
acggtctcgctcaccgcgaccgacagcaccggcgaggcgcagaacggtgagggcgactac
gtcggcgacgacgactcggccgacgccttcctcgccgcgaccgaggtgtcgatcctcaag
gagcgtgtcgggacgggcgacgtccgcaccggcgaggacgtggccttcacgctcacggcg
tcgaccgtgggcctgcaggccgccgcagacgtggtggtcgaggacaccctcccggcgggg
ctcaccttcgcgggtgtcgacacgcccttcaccgccgacccggcgctctggtcctgcacc
gtcacggacgagaccctccgctgcgccgcgctcgacgacctcgccgcgggggactccctc
tcggtcacggtgaccgcgcgcgccgtggcgccgcccgtcggcacgctgtcgcagcaggtc
accaacaccgccacggtcacgacctccaccccggagacggggacgggctcgacgaccgac
gacgagacgatcaccgtgcgggccgtgcccagcatcgcgatcgacaagcgtgctgacgtg
gcacctgctggcgacccggtccgtgccgtggtcgcaggcggggacgacgacacccagtac
gtcctcgacggccaggacccggagcgcgtcgcgcacttcgcgatcacggtgtccaacacg
ggccccgtgaccctcgtcgacgtcgaggtcgaggacctggcggcggcgcagtgcgcgggc
gtgacgatccctgacctggcccctgcgggcgaggacggcgactcgtacaccttcacgtgc
gagggcccggcaccggacgcctcgggctacaccaacgtggcggtcgccaccgccacgacc
gcgctcggcgacgacgtcgacgcgacggactcctcccgcgtggagctgtccgccctgagc
atcgacaagaccggctcgatcgccgcggtcgcaccggtcccgggtgacctcgcgaccttc
gtcttcgaggtgcgcaacacgggcagcgcgacgctcaccgacgtgaccgtcgacgacccg
ctcgacgggctctcggccctgaccttcggggcgtggccgggcgacgaggggacgctgctc
cccggcgacgtggtgcaggccaccgcgacctacccgctgacgcgcgaggacatcgacgcg
ggtggggtgacgaactccgccacggcctccggcaccgacccggccgggcaggcgcccacc
ggcgaggacacggtcacggtcaccccgggcagctcgccgtcgatcctgctcgtcaagacc
gggacgctcgcgaccgagcccgacgtggccacggtcgccggtgacgtcgtcacctacctg
ttcaccgtgaccaacgacggcaacgtcaccctgcgcgacgtcgcgatcagcgacccgctc
ccgggtctcgacgacctcgtctacgactggtcggcagccctcggcgagggcgtgctccag
ccgggcgagaccgtgacggccacggccgggtacgccctcacccaggcggacgtggacgcc
ggacgtgtcgacaaccgggcgatcgcctcgggcgaggcgcccgacggcacctccgtcgac
gacgccgacacctggctcgtccaggtcgacccgcagccgctcgtcgacctcgtgaagtcc
ggcgagctcggaccggacaccacgggccgtgccggtgacctcgtggtctacaccttcacc
gtgacgaacccgggcagcgtgacgctcaccgacgtcgaggtcaccgacctcctcgacggg
ctgtcgtcgatcagctacgcctggccgggcaccgcgggcaccctcgcgcccggggacgag
ctcgtcgccacggcgacgtacccgctcacccaggaggacgtggaccgcggcagcgtggac
aacaccgcgtcggtggtcggcaccccgccgaccggcgacgacgtcgaggcagacgacacg
gagaccgtggtggtcccgccgcagccgacgatcgccctcgtcaagaagggcgccctggcc
gcggggtcgcaggggctgctcggtgacaccgtcgagtacaccctgacggcgacgaacacc
ggcaacgtcaccctgcgtgacctgtcgatcgaggacgtcgacctgccgggcctcgcgccg
ctgacgctgggcacgtggcccggcgacgagggcgtgctggcacccggagagtcggtgagc
gccacgacgagctacgtcctcgtgcaggccgacgtcgagcgcggctacgtcgacaacctc
gcgaccacagcaggcatctctcccttcgggtcgccggtcgacggcgaggacctcgagcgt
gtcgtcaccctgcagaccccgtcgatcgtcctggagaagtcggccgcgctggccgacggc
cagaccggggtcgtgggagacgcggtcgacttcaccttctccgcccgcaacgacggcaac
gtcacgctcaccggcgtggtgatcgccgacgagctgcccgggctctcggagatcagcctc
gtctggccgggcgccgtcggcgtgctgctgcccggtgaggaggtcaccggcacggccggg
tacgtcgtgacccagcaggacgtcgacgcgggcgccgtcgtcaacacggcagaggccacc
ggcacgtcgccggccggcgtcgaggtgacggaccccgcggaggcgtcggtcctgctgccg
caggcgccggcggtcgacctcgtcaagaccgcggcgctggccgacggggcgaccggggtc
gccggcgagacggtgacgtactccttcaccgtcaccaacaccggtgacgtgaccctgcgg
ggcgtccgggtcaccgaccgtctgcccgggctctcggaggtcgtcttcggtgcctggccc
ggtgctgacggcgagctcgccccgggggcgtcggtcgacgcctcggcgacctacgtgctc
acccaggaggacgtcgaccgcggctcggtgacgaacgtcgccgtcgcgaccggtacgccc
caggtgggcccgccggtcagcgacgacgacaccgcgaccgtgcccaccgacccgcgggcc
ggcatctcgctggtcaagacggcggcgctggcgccgggagcggcaggggccgtcggtgac
acggtgacgttcaccttcgaggtgacgagccgggggacggccacgctcacgtcggtcgcg
gtgaccgacgccctcccgggcctgtcggagctcacctacggctcctggccggccgcagag
ggcacgctggccccgggcgagtccgtcacggcgacggcgacgctggtcctcacccaggag
cacgtcgacgccgggtccgtgcggaacctggccaccgtgtcgggagtctccccgtcgggc
ggggtcgtgtccgcgacggacgaggtcaccctcgccgtcccgggcaccccggtcccgccc
gccgacggcgcggacccgtcagtggccgacccggcgccgtccggacccggcacgctgccg
tggaccggggctgcggtgacagggctcgcggtgctggcagcggcgctcctggtcgcaggt
ctgctgctcgtccgccgcaggcaggcgacccgcccctga
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