Sanguibacter keddieii: Sked_09810
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Entry
Sked_09810 CDS
T01214
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ske
Sanguibacter keddieii
Pathway
ske00300
Lysine biosynthesis
ske00470
D-Amino acid metabolism
ske01100
Metabolic pathways
ske01110
Biosynthesis of secondary metabolites
ske01120
Microbial metabolism in diverse environments
ske01230
Biosynthesis of amino acids
Module
ske_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sked_09810
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sked_09810
Enzymes [BR:
ske01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sked_09810
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACZ20930
UniProt:
D1BCT2
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All DBs
Position
1134550..1135938
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AA seq
462 aa
AA seq
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MSGHPAAGAAAARPLEQHVWPTTAALTTDGELTLAGLTATDLARDFGTPAFVLDEQHFRD
RARLFRDSFSEAFGSVGAEVDVYYAGKSFLSVAVARWAREEGLRVDTCTGGELAVALRAG
VPGAEIGLHGNNKSDDEITRAIEAEVGRIVVDSFAEIDRVAELARAAGRDGGARVPVMVR
VTTGIHAGGHEFISTAHEDQKFGVSLTGGQALAALQAVLEHPELELLGAHTHIGSQIQDA
AAFEANARKMLALRAELQAATGYLLPELDLGGGYGIAYVPSDVPIDVPALARDLADVVGS
VCAELGTTVPRISIEPGRSVVGSTTVTLYTVGVVKPVTLEDGSVRTYVSVDGGMSDNIRP
ALYEAEYTARLANRTGSAETVAARVVGKHCESGDIVISDIELPADVARGDLLAVPATGAY
GRSMASNYNHVLRPPVVAVADGAARVIVRRETEDDLLSLDVG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcaccccgccgcgggcgccgcagcggcgcgtccgctcgagcagcacgtgtgg
ccgacgaccgccgcgctcaccacggacggcgagctcaccctcgccggtctgacggcgacc
gacctggcccgtgacttcggcacgccggccttcgtcctggacgagcagcacttccgcgac
cgggcacggctgttccgcgactccttctccgaggccttcgggtcggtcggggccgaggtc
gacgtctactacgccggcaagtcgttcctgtcggtcgccgtggcgcgctgggcccgtgaa
gagggcctgcgtgtcgacacctgcacgggcggtgagctcgccgtcgcgctccgggccggc
gtgccgggtgccgagatcggcctgcacggcaacaacaagtcggacgacgagatcacgcgc
gccatcgaggcggaggtcggccgcatcgtggtcgactccttcgccgagatcgaccgggtg
gccgagctggcccgcgccgcagggcgcgacggcggcgcacgcgtccccgtcatggtccgg
gtcaccacgggcatccacgccggcgggcacgagttcatctcgaccgcgcacgaggaccag
aagttcggtgtctcgctcaccgggggacaggccctcgcggccctccaggcagtcctcgag
cacccggagctcgagctcctcggcgcgcacacgcacatcgggtcccagatccaggacgcc
gcagccttcgaggccaacgcccgcaagatgctggcgctgagggccgagctccaggcggcc
accggctacctgctccccgagctcgacctcggcggcgggtacggcatcgcgtacgtcccc
tccgacgtcccgatcgacgtacccgcgctcgcccgcgacctcgcggacgtcgtcggctcc
gtctgcgcagagctcggcaccacggtcccgcgcatctcgatcgagccgggccgctccgtg
gtcggctcgacgacggtcacgctctacacggtcggcgtcgtcaagccggtgaccctcgag
gacggcagcgtccgcacctacgtgtcggtcgacggcgggatgagcgacaacatccggccc
gccctctacgaggccgagtacaccgctcgcctggccaaccgcaccggctcggcggagacc
gtcgcggcccgggtggtcggcaagcactgcgagagcggcgacatcgtcatctccgacatc
gagctcccggcggacgtcgcccgcggcgacctcctcgcggtgcctgcgaccggcgcctac
ggccgctcgatggccagcaactacaaccacgtgctgcgcccgcccgtggtggccgtggcc
gacggcgccgcgcgcgtgatcgtccgtcgcgagaccgaggacgacctgctctcgctcgac
gtcggctga
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