Sanguibacter keddieii: Sked_15750
Help
Entry
Sked_15750 CDS
T01214
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ske
Sanguibacter keddieii
Pathway
ske03030
DNA replication
ske03430
Mismatch repair
ske03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sked_15750
03430 Mismatch repair
Sked_15750
03440 Homologous recombination
Sked_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ske03032
]
Sked_15750
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_15750
Enzymes [BR:
ske01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sked_15750
DNA replication proteins [BR:
ske03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sked_15750
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sked_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACZ21510
UniProt:
D1BFZ9
LinkDB
All DBs
Position
complement(1758800..1760650)
Genome browser
AA seq
616 aa
AA seq
DB search
MHAQPSSDLRPAPGARAAGKRLSGALRPATGLLRGPAEVETTGTPVQLGLDELGTPLSEV
TFVVVDLETTGGSSKDAGITEIGAVKVRGGEVIGEFQSLVNPGHPVPAFIARLTGITTLM
VSSAPSIELVLPSFLEFARGTVLVAHNAPFDISFLKAAARSMDLAWPGNQVLDTVPLARR
VVTRDEAPNHKLGTLAALFRATITPDHRALSDARATVDVMHALFDRMAPLGITHLEDLAT
ATDPVPADVRRRRHLADGMPSGPGVYMFVGPQDEVLYVGTSTDVRTRVRSYFTAAEKRGR
MTEMIRLAVTVRAVPCATALEARVRELRLITEHAPRYNRRSKHPERMHWVRVSSEAYPRL
TVVRDGTAALGEPVVGPFVSRARATEAVEALQSAHQVRQCTKKLPALPSATASACVLAEM
GRCSAPCVRPSSRPTTAPDDDYADVVAGLVRSMEHDPSPVVAALARRIAEHVEQQRFEDA
GTDRDRLEAFLAGAARAQRLAPVVASAQIVAARPTSAAGWEIVVVRYGRLATTAVCRHGE
DPLAAVEAAVAAAEHVPAPTSAGPACHPEETDLVVAWLRSEGVRLVESDLGLTCPVAGAE
RYVVGRTTADVVSAVS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgcagccctccagcgacctgagaccggcacccggagcccgggcggcggggaag
cgcctctcgggcgccctgcgccctgccaccggtctcctgcgggggcctgccgaggtcgag
acgaccggcaccccggtccagctcggcctcgacgagctcggaacgcccctgagcgaggtg
accttcgtggtggtcgacctcgagacgaccggcggatcgtcgaaggacgcgggcatcacc
gagatcggtgcggtcaaggtccgcggcggcgaggtgatcggcgagttccagtccctggtc
aaccctgggcacccggtgccggccttcatcgcccgcctcaccggcatcaccacgctcatg
gtctcgagcgccccctcgatcgagctcgtcctgccgtcgttcctcgagttcgcccgcggg
accgtcctcgtcgcgcacaacgcccccttcgacatctcgttcctcaaggccgcggcgcgg
agcatggacctcgcctggccggggaaccaggtcctggacacggtccccctcgcccggcgg
gtcgtcacccgcgacgaggcgccgaaccacaagctcgggaccctcgcggcgctcttccgg
gcgaccatcaccccggaccaccgggcactgtccgacgcccgggcgacagtcgacgtgatg
cacgcgctcttcgaccgcatggcgccgctgggcatcacgcacctcgaagacctcgcgacc
gccaccgacccggtccccgccgacgtccgacggcgtcggcacctcgccgacggcatgccg
agcggtcctggggtgtacatgttcgtcggcccgcaggacgaggtcctctacgtcgggacc
tcgacggacgtgcgcacccgcgtgcggagctacttcacggccgccgagaagcgcggccgc
atgacggagatgatccgcctcgccgtcaccgtcagggccgtcccgtgcgcgaccgcgctc
gaggcacgggtgcgcgagctgcggctcatcaccgagcacgccccgcggtacaaccgtcgg
tccaagcaccccgagcggatgcactgggtccgggtgtcgtcagaggcgtacccccggctg
acggtcgtgcgcgacggcaccgccgcgctcggcgagcccgtcgtcggccccttcgtctcc
cgcgcccgggccaccgaggccgtcgaggcgctccagtcggcgcaccaggtgcgccagtgc
accaagaagctgcccgccctgccgtcggcgacggcgtcggcgtgcgtgctggccgagatg
ggacgctgctccgccccgtgcgtgcgcccgtcctcgcgccccacgacggctccggacgac
gactacgccgacgtggtcgccgggctggtccggtccatggagcacgacccgagccctgtg
gtcgccgccctggcccggaggatcgccgagcacgtggagcagcagcgcttcgaggacgcc
gggacggaccgtgaccggctggaggccttcctcgccggtgctgcgcgcgcccagcggctc
gcgccggtcgtggcgagcgcccagatcgtcgcggcccggccgacgtcggccgccgggtgg
gagatcgtcgtggtgcgctacgggcgcctcgccacgacggcggtgtgccggcacggcgag
gacccgctggccgcggtcgaggcggccgtcgcagccgccgagcacgtcccggccccgacc
tcggccggccctgcctgccacccggaggagaccgacctcgtggtcgcgtggctgcggtcc
gagggcgtgcggctcgtcgagagcgacctcgggctcacctgccccgtggccggcgccgag
cggtacgtggtcggccggaccaccgccgacgtcgtgtccgcggtgtcctga
DBGET
integrated database retrieval system
