Sanguibacter keddieii: Sked_15850
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Entry
Sked_15850 CDS
T01214
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ske
Sanguibacter keddieii
Pathway
ske00900
Terpenoid backbone biosynthesis
ske01100
Metabolic pathways
ske01110
Biosynthesis of secondary metabolites
Module
ske_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sked_15850
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ske01006
]
Sked_15850
Enzymes [BR:
ske01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sked_15850
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sked_15850
2.5.1.29 geranylgeranyl diphosphate synthase
Sked_15850
Prenyltransferases [BR:
ske01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sked_15850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ACZ21520
UniProt:
D1BG09
LinkDB
All DBs
Position
complement(1772340..1773449)
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AA seq
369 aa
AA seq
DB search
MSSLAQPLVDREDLREQVDTRLRAVLAEQRTVLAGISGDADPLADAWSQMLRGGKRLRAA
FAYWSWRAHGGAPGGAEAASIVGVGAALELFQAAALFHDDVMDRSDTRRGVPTAHRTFAA
RHRDAGWSGDADQFGLSAAILLGDLSLVASEDEFLRAVRDVPAAAVAPARSLFTQMRTEV
TVGQYLDMHAQMLPWTDDFDADERRAREVVRSKSARYSVESPIAIGAALAGADAEQLATC
SAFGLPLGEAFQLRDDLLGAFGDPEATGKPAGDDLREGKRTLLVVRAMRALGPVERAELA
SRLGAPDLTASDVEKMQRTIRETGAVDEVEQLIETLSGSALATLESSGLSGPAVETLGDL
ARAAVQRAA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccctcgcccagcctctcgtcgaccgtgaagacctccgagagcaggtggacacc
cggctgcgcgcggtgctcgccgagcagcgcaccgtcctcgccggcatcagcggcgacgcc
gaccctctcgccgacgcctggtcccagatgctgcgcggcggcaagcggctgcgcgccgcc
ttcgcgtactggtcgtggcgcgcgcacggcggggcgcccggcggcgccgaggcggcgagc
atcgtcggcgtgggcgccgcgctcgagctcttccaggcggccgcgctgttccacgacgac
gtcatggaccggtcggacacccgccgtggcgtcccgaccgcgcaccgcaccttcgcggcc
cggcaccgcgacgccgggtggtccggcgacgccgaccagttcggcctctcggccgcgatc
ctgctgggcgacctcagcctggtggccagcgaggacgagttcctccgggcggtcagggac
gtccccgcggcagccgtcgcgccggccaggtcgctgttcacccagatgcgtaccgaggtg
accgtcgggcagtacctcgacatgcacgcacagatgctcccgtggaccgacgacttcgac
gcggacgagcggcgggctcgcgaggtcgtccggtccaagtccgcgcgctacagcgtcgag
agcccgatcgcgatcggcgccgcgctcgccggagccgacgcggagcagctcgcgacctgc
agcgccttcggcctccctctcggcgaggccttccagctccgcgacgacctgctcggcgcc
ttcggagacccggaggcgaccggcaagcccgcgggcgacgacctgcgagagggcaagcgc
acgctcctcgtcgtccgagcgatgcgtgccctcggccccgtcgagcgcgcagagctcgcg
tcgaggctcggcgcccccgacctcaccgcctcggacgtggagaagatgcagcgcacgatc
cgcgagaccggcgccgtcgacgaggtcgagcagctcatcgagacgctcagcggcagcgcc
ctggcgaccctcgagtcgtcaggcctctcgggccccgcggtcgagaccctcggcgacctc
gcccgggcggcggtccagcgcgccgcctga
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