Sanguibacter keddieii: Sked_15910
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Entry
Sked_15910 CDS
T01214
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ske03032
]
Sked_15910
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_15910
Enzymes [BR:
ske01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sked_15910
DNA replication proteins [BR:
ske03032
]
Prokaryotic type
DNA Topoisomerases
Sked_15910
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sked_15910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACZ21526
UniProt:
D1BG15
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Position
1778485..1780614
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AA seq
709 aa
AA seq
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MTTASAESSYTSRHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALAGHC
TRIGIVLHADTSVTVTDDGRGIPVDIESKTGLTGVEVVFTKLHAGGKFGGGSYTASGGLH
GVGASVVNALSARLDVEVDRASKVHKMTFRRGEPGLFDDPKTGPSPDSAFTPFVSNSELA
IVGKAKRGTTGTRVRYWADRQVFPKTAVFAYDELVTRVRQTTFLVPGLTITVRDERGLEG
TPGADGPHEETFVHHGGTVDFVEFLAPDTPVTATWHLTGEGSFKETVPVLDDRGHMVAQE
VSRDCEVDLALRWGTGYDTEVRTFVNIISTPKGGSHLSGFEAGLLKVMRKAVETNARKLK
VSTKDNAERIEKDDVLAGLTAVLTVRLAEPQFEGQTKEVLGTAPVRAIVARVVEQQIGAM
LTSAKRDEKTQAALLMDKVVAEMRARLSARKQKEISRRKNALETSSLPTKLADCRSDDVA
RSELFIVEGDSALGTAKLARSSDFQALLPIRGKILNVQKASVSDMLRNAECAAIIQVLGA
GSGRSFDLEAARYGKVVLMTDADVDGAHIRTLLLTLFFRYMRPLVDSGRVYAAVPPLHRV
EVIGAGSRKNEYIYTYSEAELAAVLKKLDRSGKRYKDDIQRYKGLGEMDADQLAETTMDP
RHRTLRRVTAEHAENAERVFELLMGSDVAPRKDFIVAGASDLDRARIDA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccgcatccgctgaatccagctacacctctcggcacctctccgtcctcgaaggg
ctcgaggcggtgcgcaagcgaccgggcatgtacatcgggtcgaccgactcgcgcgggctc
atgcactgcctctgggagatcatcgacaactccgtcgacgaggcgctcgccgggcactgc
acccgtatcggcatcgtgctgcacgctgacacctccgtgaccgtcaccgacgacggtcga
ggcatccccgtcgacatcgagtcgaagaccgggctcaccggcgtcgaggtcgtcttcacc
aagctgcacgccggcggcaagttcggcggcgggtcctacacggcgtcgggtggtctccac
ggtgtgggcgcctccgtcgtcaacgcgctctccgcacgcctggacgtcgaggtcgaccgg
gcgagcaaggtccacaagatgaccttccggcggggcgagcccgggctgttcgacgacccc
aagaccgggccgagccccgactctgcgttcacgcccttcgtcagcaactccgagctcgcg
atcgtcggcaaggccaagcgggggaccacgggcacccgggtccgctactgggcggaccgc
caggtgttccccaagaccgcggtgttcgcctacgacgagctggtgacgcgcgtgcgccag
accacgttcctcgtcccgggcctgaccatcacggtgcgcgacgagcgcggcctcgagggg
accccgggcgccgacggcccgcacgaggagaccttcgtgcaccacggcgggacggtcgac
ttcgtcgagttcctcgcgcccgacacaccggtgaccgccacgtggcacctcaccggtgag
ggcagcttcaaggagaccgtcccggtcctcgacgaccgcggtcacatggtggcccaggag
gtgtcgcgcgactgcgaggtcgacctcgccctgcgctgggggaccggctacgacaccgag
gtccggaccttcgtcaacatcatctcgacgcccaagggcggctcgcacctctccggcttc
gaggctggcctcctcaaggtgatgcgcaaggccgtcgagaccaacgcgcgcaagctcaag
gtgtcgaccaaggacaacgccgagcgcatcgagaaggacgacgtcctcgcagggctgacg
gccgtgctgacggtgcgcctggccgagccgcagttcgaggggcagaccaaggaggtcctc
gggaccgccccggtccgcgcgatcgtcgcccgggtcgtcgagcagcagatcggcgccatg
ctcacctcggccaagcgggacgagaagacgcaggcggccctcctcatggacaaggtcgtc
gccgagatgcgcgcgcgcctgtccgcccgcaagcagaaggagatctcgcggcgcaagaac
gccctcgagacgagctcgctgcccaccaagctggccgactgccgcagcgatgacgtcgcg
cgctccgagctgttcatcgtcgagggtgacagcgcgctcggcaccgcgaagctcgcgcgg
tcctccgacttccaggcgctgctgccgatccgcgggaagatcctcaacgtgcagaaggcc
tcggtgagcgacatgctccgcaacgccgagtgcgcggccatcatccaggtgctcggcgca
ggctcgggccggtccttcgacctcgaggcggcgcgctacggcaaggtggtcctcatgacc
gacgccgacgtcgacggtgcgcacatccgcaccctcctgctgacgctgttcttccggtac
atgcgccccctggtcgactccggcagggtgtacgcggccgtcccgccgctgcaccgggtc
gaggtcatcggtgccgggtcgcgcaagaacgagtacatctacacgtactccgaggccgag
ctcgcggccgtcctcaagaagctcgaccgctccggcaagcgctacaaggacgacatccag
cggtacaagggcctgggcgagatggacgccgaccagctggccgagaccaccatggacccg
cgccaccgcacgctccgtcgtgtgacggcggagcacgcggagaacgccgagcgcgtcttc
gagctgctcatgggctccgacgtcgcgccccgcaaggacttcatcgtggcgggcgcgagc
gatctcgaccgggctcgcatcgacgcctga
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