Sanguibacter keddieii: Sked_20220
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Entry
Sked_20220 CDS
T01214
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ske
Sanguibacter keddieii
Pathway
ske03030
DNA replication
ske03410
Base excision repair
ske03420
Nucleotide excision repair
ske03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sked_20220
03410 Base excision repair
Sked_20220
03420 Nucleotide excision repair
Sked_20220
03440 Homologous recombination
Sked_20220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ske03032
]
Sked_20220
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_20220
Enzymes [BR:
ske01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sked_20220
DNA replication proteins [BR:
ske03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sked_20220
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Sked_20220
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sked_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Myb_Rap1
HHH
Motif
Other DBs
NCBI-ProteinID:
ACZ21946
UniProt:
D1BHM6
LinkDB
All DBs
Position
complement(2254534..2257239)
Genome browser
AA seq
901 aa
AA seq
DB search
MRDRFAGVTDTSRPRLLLIDGHSMAYRAFFALPVDKFSTTSGQHTNAVHGFISMLATLLR
VEEPTHVAVAFDAGSTTFRTEALPSYKGTRDATPEPFKGQVPLIKEVLEAMHVRHLDKDN
FEADDILATLSSQADALGMEVLVCSGDRDSLQFVNENVTVLYPVKGVSELARMTPDAVRT
KYGVEPHQYPELAALVGETSDNLPGVPGVGPKTAAKWINQFGSLEQILDRAGEIKGKAGE
SLRDHLDVVRLNRQLNHLLTDVELPFGPDDLRVQPWDREAMSTVFDALQFRTLRERLFAM
HPSADDDENAAPAVEVTVEDLAPGLLEAWFAEHDQRPLGLEVAGRPVPAGGDAWALAIAD
GPGSAVALDLTDLSAADDTALSDWLSDPTRAKVVHGGKSVWHELASRGYSLEGVVFDTEL
AAYLCFPDQRSYDLGDLAERHLHRELTPVDTSSDQGALDLSVGEDSEGGRLAVRAAALTD
LAEVLRGELGDRSAEPLLTELELPLSAVLVHMERHGIAMDVDYLRELEQHFGELVTGAAA
SAYEVIGREVNLGSPKQLQEVLFDQLDMPKTKKIKTGYTTDAAALADLFVKTEHPFLKFL
LDHRDSTRLRQTVEGLLKSVADDGRIHTTFQQTIAATGRLSSTEPNLQNIPIRTEAGRRI
RRAFVVGDGYETLLTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHNYVGSRVFQVETSA
VTPAMRSKIKAMSYGLAYGLSSFGLSNQLNIDVKEASKLMEDYFTRFGGVRTYLAGVVDE
ARANGYTATIMGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLGVEKEIA
VRGLRSRLLLQVHDELILEVGHGELEELTTLVREQMGSAADLLVPLDVSVGTGSSWHDAG
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagagataggtttgcaggtgtgaccgacacttcgcgacccaggctcctgctgatcgat
ggccactccatggcgtaccgggcgttcttcgccctcccggtggacaagttctccaccacg
tccggccagcacaccaacgccgtgcacggcttcatctcgatgctcgccacgctgctgcgc
gtcgaggagcccacgcacgtggccgtcgccttcgacgccgggtccacgaccttccgcacc
gaggccctccccagctacaagggcacccgcgacgcgacccctgagcccttcaagggccag
gtgccgctcatcaaggaggtcctcgaggcgatgcacgtgcgccacctcgacaaggacaac
ttcgaggccgacgacatcctcgcgaccctgtcgtcgcaggccgacgctctcgggatggag
gtcctcgtctgctccggcgaccgtgactccctgcagttcgtcaacgagaacgtcacggtg
ctctaccccgtcaagggtgtgtccgagctcgcgcgcatgaccccggacgccgtccgcacc
aagtacggcgtggagccgcaccagtatccggagctcgcggctctcgtcggcgagacgagc
gacaacctgcccggcgtcccgggcgtgggccccaagacggcggccaagtggatcaaccag
ttcggcagcctcgagcagatcctcgaccgcgccggcgagatcaagggcaaggcgggggag
tcgctgcgcgaccacctcgacgtcgtgcgcctcaaccgccagctcaaccacctgctcacc
gacgtcgagctgcccttcggccccgacgacctccgcgtgcagccgtgggaccgcgaggcc
atgagcacggtcttcgacgcgctccagttccgcacgctgcgcgagcgcctcttcgcgatg
cacccctcggccgacgacgacgagaacgcggcccccgcggtcgaggtcaccgtcgaggac
ctcgccccgggcctgctcgaggcgtggttcgccgagcacgaccagcgcccgctcggcctc
gaggtcgccggccggcccgtcccggcgggcggcgacgcctgggccctcgccatcgccgac
ggtcccggctcggccgtcgccctcgacctcacggacctctcggccgccgacgacaccgcg
ctgagcgactggctctccgacccgacccgcgccaaggtggtgcacggcggcaagagcgtc
tggcacgagctcgcctcccgcggctactcgctcgagggcgtcgtcttcgacaccgagctc
gccgcctacctctgcttccccgaccagcgcagctacgacctcggcgacctcgccgagcgc
cacctgcaccgcgagctcaccccggtcgacacctcgagcgaccagggtgcgctcgacctg
tcggtcggcgaagacagcgagggcgggcggctcgccgtgcgcgccgccgcactcaccgac
ctcgccgaggtgctccgcggcgagctcggcgaccgcagcgccgagccgctcctcaccgag
ctggagctgccgctgtcggccgtcctcgtgcacatggagcgccacggcatcgccatggat
gtcgactacctgcgtgagctcgagcagcacttcggcgagctcgtcaccggtgccgcggcg
tcggcctacgaggtgatcggccgcgaggtgaacctcgggtcgccgaagcagctccaagag
gtgctgttcgaccagctcgacatgcccaagaccaagaagatcaagaccgggtacacgacc
gacgccgccgccctggccgacctcttcgtcaagacggagcacccgttcctcaagttcttg
ctcgaccaccgcgactcgactcgcctgcgccagaccgtcgaggggctcctcaagtcggtc
gcggacgacggccggatccacacgaccttccagcagaccatcgccgcgaccgggcgcctc
agctcgaccgagccgaacctgcagaacatccccatccgcaccgaggcgggccgccgcatc
cgccgtgccttcgtggtcggtgacggttacgagacgctgctgaccgccgactactcgcag
atcgagatgcgcatcatggcgcacctgtcgggcgacgaagggctcatcgaggccttccgt
accggagaagacctgcacaactacgtcgggtcacgcgtgttccaggtcgagacctcagcg
gtgacgccggccatgcggtcgaagatcaaggcgatgtcgtacgggctcgcctacgggctg
tcgtccttcggtctctccaaccagctgaacatcgacgtcaaagaggcgtcgaagctcatg
gaggactacttcacgcgcttcggcggcgtgcgcacctacctcgccggcgtcgtcgacgag
gcgcgcgccaacggctacaccgccaccatcatgggacgtcgccggtacctgcccgacctc
acgagcgacaaccggcagcgtcgtgagatggccgagcggatggccctcaacgcgccgatc
cagggcagcgcggccgacatcatcaaggtcgcgatgctcggcgtcgagaaggagatcgcc
gtgcgcggcctgcgctcccggctgctcctgcaggtgcacgacgagctcatcctcgaggtg
ggccacggtgagctcgaggagctcaccacgctcgtgcgcgagcagatggggtccgccgcc
gacctgctcgtcccgctcgacgtgtccgtcggcaccggctccagctggcacgacgcgggg
cactga
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