Sanguibacter keddieii: Sked_23430
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Entry
Sked_23430 CDS
T01214
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ske03016
]
Sked_23430
Enzymes [BR:
ske01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sked_23430
Transfer RNA biogenesis [BR:
ske03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sked_23430
Prokaryotic type
Sked_23430
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF4402
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACZ22258
UniProt:
D1BJ64
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All DBs
Position
complement(2608477..2609508)
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AA seq
343 aa
AA seq
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MTHETPTTGPRARADRPVRPRRPTAPDGLVLVDKPAGWTSHDVVARTRGLAGTRKVGHAG
TLDPMATGVLVLGVGRATRLLTYVVGTDKEYTATIRLGQATTTDDAEGEMLTTPGAAGVA
ADAVAAGIARLTGEIQQVPSSVSAIKVDGKRAYALVRSGADVALDARTVTISRFDVHAVR
EVEVTVEGDSEAGTATTTTTVLDVDVTVVCSSGTYIRALARDLGADLGVGGHLTALRRTR
VGGYTLDAARSFEELESQADADGTLATLPLADAARGTFPVRVLTAEEVVALSYGQWLEPT
GASGTTAALSPEDELVALVEDVTRSGHVKAKPVIVFAPSQAST
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgagacaccgaccaccggcccccgtgcgcgggcagaccgtccggtccgcccg
cgcaggcccaccgcgcctgacgggctcgtgctcgtcgacaagccggcgggctggacgagc
cacgacgtcgtcgcgcggacccgcggactggccgggacccgcaaggtcggccacgccggg
accctcgacccgatggcgaccggggtgctggtcctcggtgtcgggcgcgcgacgcggctg
ctgacgtacgtggtcggcaccgacaaggagtacaccgcgacgatccgcctcgggcaggcg
accaccacggacgacgccgagggcgagatgctgaccacccccggtgccgcgggagtcgct
gccgacgccgtcgccgcagggatcgcccgcctcaccggtgagatccagcaggtcccgagc
tcggtgagcgccatcaaggtggacggcaagcgcgcctacgcgctcgtccggtcgggcgcc
gacgtggccctcgacgcccgcacggtgacgatcagccgcttcgacgtgcacgcggtgcgt
gaggtcgaggtgacggtcgagggcgacagcgaggccgggacggccaccaccacgaccacc
gtgctcgacgtcgacgtgaccgtggtctgctcgtcgggcacctacatccgtgccctggcg
cgtgacctcggggcagacctgggcgtcgggggccacctcaccgcgctgcgccggacgcgc
gtcggcgggtacacgctcgacgcggccaggtcgttcgaggagctggagtcccaggccgac
gccgacggcacgctggcgaccctcccgctggccgacgcggcccgggggaccttcccggtg
cgggtgctcacggccgaggaggtcgtcgcgctctcgtacgggcagtggctcgagccgacc
ggcgcctccgggacgaccgcggcgctctcgcccgaggacgagctcgtcgccctcgtcgag
gacgtcacgcgcagcggccacgtcaaggcgaagccggtcatcgtcttcgcgccgtcccag
gcgtccacctag
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