Sanguibacter keddieii: Sked_24870
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Entry
Sked_24870 CDS
T01214
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ske
Sanguibacter keddieii
Pathway
ske03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sked_24870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ske03019
]
Sked_24870
03009 Ribosome biogenesis [BR:
ske03009
]
Sked_24870
Messenger RNA biogenesis [BR:
ske03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sked_24870
Ribosome biogenesis [BR:
ske03009
]
Eukaryotic type
Pre-60S particles
RNases
Sked_24870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACZ22396
UniProt:
D1BJY7
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All DBs
Position
2775070..2775732
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AA seq
220 aa
AA seq
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MASTSKNDRIVWIDCEMTGLDLGADALVEVAAVVTDSELTVLGEGIDIIVRPPDEALEQM
NDFVRDMHTSSGLIDELAAGTTLADAEAQVLDYLRTFVPEPGKAPLGGNSVATDKMFLER
DMKDLVAHLHYRIIDVSSIKELARRWYPRVYFASPTKNGGHRALADILESIDELRYYRSA
LFVPQPGPDTQTARSIAAGIAQDSVSGTLSVPTSYKVAKG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtggctagcaccagcaagaacgaccgcatcgtctggatcgactgcgagatgaccgggctc
gacctgggcgccgacgccctcgtggaggtcgccgccgtcgtcaccgactccgagctcacc
gtcctcggcgagggcatcgacatcatcgtccgaccgcccgacgaggcgctcgagcagatg
aacgacttcgtccgcgacatgcacaccagctccgggctcatcgacgagctcgccgccggc
acgacgctcgccgacgccgaggcgcaggtcctcgactacctgcggaccttcgtgcccgaa
cccggcaaggcgcccctcggcggcaactcggtcgcgaccgacaagatgttcctcgagcgc
gacatgaaggacctcgtcgcccacctgcactaccggatcatcgacgtgtcctccatcaag
gagctcgcccgacgctggtacccccgcgtctacttcgcgtcgcccaccaagaacggcggc
caccgcgccctcgccgacatcctcgagagcatcgacgagctgcgctactaccgctccgcg
ctgttcgtcccccagccggggcctgacacccagacggcgcggagcatcgcggccgggatc
gcccaggactcggtgtcggggacgctgtcggtgccgacgagctacaaggtcgcgaagggc
tga
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