Sanguibacter keddieii: Sked_26640
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Entry
Sked_26640 CDS
T01214
Name
(GenBank) putative collagen-binding protein
KO
K20276
large repetitive protein
Organism
ske
Sanguibacter keddieii
Pathway
ske02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sked_26640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
Big_3_5
PEGA
SdrD_B
EMC7_beta-sandw
SpaA
fn3_3
Motif
Other DBs
NCBI-ProteinID:
ACZ22568
UniProt:
D1BKU1
LinkDB
All DBs
Position
complement(2968432..2974878)
Genome browser
AA seq
2148 aa
AA seq
DB search
MTEQITPTPAVGLGAPSVLVEPGAHAPAGRAATLRVHARNLADGPRDVTVTVMGLDDGWS
PEPVRLPAVEPDATVSTEIDLLPVVGAVPGDYPFVVVVQSAAPGAGPTTTLAESVLVVDA
PSEVLLTVEPADSRMRMRRRLSVVLSNTGVEPVELTVKTQTSRGLRLELPSRTLTVPGRQ
TVRMSATARNQRPQLMGHLDRRTFSVVAQGRQAPARFSGTVTARPLVSAAMMRVVGLLMV
VVLWGGGLLVALPWFTDRAGDQPVTAQPAATVVTDPAAGPDGSGGTEGAAGGSGADGSGA
PGEDDGVLPDAGVRVGGVVTADDPSGVRVQIAPASIIPTTTQQTAAGTPAASGGGGGAAR
GAGTSRVVPAAVVAGTGTSGTLASSDDATSSSGSARAITKTSALGLPLGSTSAAGQSSTV
SAARSTETGSDGAWAFAGLAPTLNYLVTVSKPGYQTVRQVVSGAEAAAAALDVTLVAGDG
SLSGVVTGPDGAGAGGVTVVLSDGTTTVSTTTATSGTVGSWAVDGLSTPSTYLVTAQGAG
LGAQSVLVTLSAGGSATAPLSLQDGVATLSGTVTGPDALGAVSGVGGATVTATAGDTTRT
ASTLTSGRPGAYSLADLPVPGSYTLTVEAPGFATQTLELDLGPESSAAPADVLLGSSSGV
AQGTVRDTAGTALSGAGLSLTNGTDAYKTMSTSDGSGSFRFNGIVPGEYVLSAELFGHLT
ASTTVTVASGGTVGADLVLTPVAGDGLVDTSRIRGRASDARTNGQIDCVALAPGEECLVT
VSLTAQNPDGTQRQVTVTSEPDLEYVIPAADDTGLLPGLYELTVSAPGYESSSVKVNVPM
AQTVSAGQVALFPSPSLSGTVLTRIGAVPDGTCVVAVASGQPAPTGGCTAPAPDTCQVDG
GRCAFTGVNGGYTITSMPAGTYTVTVLPGSAEYRVSGTIPPVTLVPGDVRRVDVTLDRLA
RLSVTTLVDRGTGAITPAAGAVVTPVLLAGSGKPVVPGAPGTPGTPVVSVDGVAALSMLE
PGTYRFDVTWQDDDGVQLTGSIAGIELAFNQERTTQLVLTRTVRVFQGALMTQLTAGIQT
PVEDREVVVTGIIGYDGVTPVRSSVTLVTDDDGQFATSATPDTSGYLPLVSDKVDVTVAA
RTEAPFDYKALSLTGVDFVSGTSTIIELQPVGQPFSGTLTLAGDGPDARAPASQVLFEVV
SGPPGASSVSISAVTTASGTSFPLLWRDANQPASGAGTLARPGTYVVRATLAGHEPVQET
IDVVVETGNAPVTFKLARFGSLTVAPVTCSEPLTVPPCGDVGTTPVPRAEITVSGNGIQQ
TATLAQGTPEAEFGELPSGDYRVVVRAAGMARLTTTLTVKAEDTDAQPVFLTRLGTIRGT
VWSTTARAGDPDGTRPVLRKLPGAVVTATGPGGAEFTVVTDADGAYSITGTAALEGLQTG
RWSVQARLDGYTAPPAQTVDVTGPGTFEKDVTMPFTPVTVTVFVVNDLIDGEAVPGLDVV
LQDGIRSVPATCPPVATGSATTTCDRGEYRFPDVLPVQSILSISGAGYRSLQVSITPPVG
QPNSAVTVPLVANTNAIGGIVTGQRGSGTPVPLKDETVRLTAVPAAPTDPDAPVDPPVTS
DTMTGVDGSFLFRDLTDGAYDISVEAAGYSPVTRRVTVVGGQAALVDLRLFQVTRAVTVS
VTSGSDLTGTLVSLTAQDGTTLPGTIAGQPLVRSGATYTTIFNQVPEGAWTATFTGASGH
PWSTTRVLDAGDTTLEATIDEVRLRLAATGPDSGAQLTVTVEGSPSDTDGAIVDLTRTVS
VGASAETLYLLAGTYELTPSTVAGATVSPATVTIAPSESDRLVTFAVQSPSTTTLPALTD
WEIGTAKTLVATVRGPQSSAATATGTVTFSLAGTELDVVAVDAAGRATLSGTLPAGTVPG
ATEVTAVYSGSTSLAGSQASRTVTVTAAGTTTTLAAPGPLTVGTPTTLSATVSAPSGGTV
TGSVEFLRGGDVVATGTLAGGTATASFTPTSAGPATLSARFVASGSYAASTSAGRSVTAA
RGPSTTTATAPAAVGGDVTARVAWGGAPATAGTVEVSSPGGQVSCPAVSLTDGVASCSTA
GLPAGTHTITVVYSGTVDRLGSQTTVQVVVPAAPPEPGETEDPDDGTP
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagatcacccccacacccgccgtcggcctcggcgccccgagcgtcctcgtg
gagcccggcgcgcacgccccggccggacgggcggcgaccctgcgggtgcacgcccgcaac
ctcgccgacgggccccgcgacgtcaccgtcacggtcatgggcctcgacgacggctggtcg
cccgagcccgtgcggctcccggcggtcgagcccgacgcgacggtgtcgaccgagatcgac
ctgctccccgtggtcggtgccgtcccgggcgactaccccttcgtggtggtcgtgcagtcc
gcagcccccggtgccggcccgacgaccaccctcgcggagagtgtgctggtcgtcgacgca
ccgagcgaggtgctgctgaccgtcgagcccgccgactcacggatgcgcatgcgacgcagg
ctgtcggtggtcctgtcgaacaccggcgtcgagccggtcgagctcaccgtgaagacccag
acgtcccgcggcctgcgtctcgagctgccgtcgcgcacgctcaccgtccccgggcgccag
accgtgcggatgtcggcgacggcccgcaaccagcgcccgcagctcatggggcacctcgac
cgcaggaccttctccgtggtcgcccagggccgccaggcacctgcccggttcagcggcacc
gtcaccgcccgcccgctcgtcagcgcggcgatgatgcgagtggtcgggctcctcatggtc
gtggtcctctggggcggcgggctcctcgtcgcgctgccctggttcaccgaccgtgccggc
gaccagccggtgaccgcgcagcccgcggcgaccgtcgtgacggatcctgctgccggtccc
gacggcagcggcggcacagaaggggccgcgggcggctcaggggcagacggctccggcgcc
cccggcgaggatgacggcgtcctgcccgacgccggcgtgcgggtcggcggtgtcgtcacc
gccgacgacccctccggcgtccgggtgcagatcgccccggcgagcatcatcccgaccacg
acgcagcagaccgccgccggtacgccggccgcctcgggcggcggcgggggagccgcacgc
ggggcgggcacgtcccgcgtcgtccctgcggcggtcgtggcggggacgggcacgtcgggc
accctcgcgtcctccgacgacgccacctcgtcctcgggcagcgcccgtgcgatcaccaag
acctcggcgctcgggctcccgctgggctcgacctcggccgcaggtcagtcgtcgaccgtc
tccgcggcgcgcagcaccgagaccggctccgacggcgcctgggccttcgccgggctcgcc
ccgacgctcaactacctcgtcaccgtgtccaagcccggctaccagaccgtccgccaggtc
gtctccggggccgaggcggcggcagcagcgctcgacgtcaccctcgtcgcgggcgacggc
agcctctccggcgtcgtcaccgggcctgacggcgcaggcgcgggcggggtgacggtcgtg
ctgagcgacggcaccacgaccgtgagcaccacgacggccacgagcggcaccgtcgggtcc
tgggccgtcgacggcctctcgacccccagcacctacctcgtcaccgcgcagggtgcggga
ctcggggcgcagtccgtcctcgtcacgctctccgcgggcggctcggcgaccgcacccctg
agcctgcaggacggcgtcgcgaccctctccgggaccgtcaccggaccggacgccctcggc
gccgtctccggggtcggcggcgcgacggtcaccgcgaccgccggcgacaccacccgtacc
gcctcgaccctcacctccggccggcccggcgcgtacagcctcgccgacctgccggtcccg
ggcagctacacgctcaccgtcgaggcacccggcttcgcgacccagaccctcgagctcgac
ctcgggcccgagtcctcggccgcccccgcggacgtgctgctcggctcgtcgagcggcgtc
gcgcagggcaccgtccgcgacaccgcaggcaccgcgctctcgggcgccgggctcagcctc
accaacggcaccgacgcctacaagacgatgtcgacctccgacggctccggctccttccgc
ttcaacggcatcgtccccggcgagtacgtgctgtccgccgagctgttcggccacctcacc
gcgtcgacgaccgtcacggtcgcgtcgggcgggaccgtgggcgccgacctcgtcctcacc
ccggtcgccggcgacggcctcgtcgacacgtcgcgcatccgcgggcgtgcgagcgacgcc
cggaccaacgggcagatcgactgcgtcgcgctcgccccgggcgaggagtgcctcgtcacg
gtctcgctcaccgcgcagaaccccgacggcacgcagcgccaggtgacggtcacctcggag
cccgacctcgagtacgtcatccccgccgccgacgacaccggcctgctccccgggctctac
gagctcaccgtctccgcccccgggtacgagagctcgagcgtcaaggtcaacgtgcccatg
gcgcagaccgtctcggccgggcaggtcgcgctgttcccgtcgccgtcgctcagcgggacg
gtgctcacccgcatcggcgccgtgccggacgggacctgcgtcgtcgcggtcgcctccggc
cagcctgcgcccaccgggggctgcaccgcacccgcgccggacacctgccaggtcgacggc
ggtcgctgtgccttcacgggcgtcaacggtggctacaccatcacctcgatgccggcgggc
acctacaccgtgacggtgctccccggcagcgcggagtaccgcgtctcaggcaccatccct
cccgtgacgctcgtgcccggcgacgtccgtcgcgtcgacgtgaccctggaccggctcgcc
cggctgtcggtcacgaccctcgtggaccgcggcaccggcgccatcacgcccgccgccggg
gctgtggtgaccccggtcctgctcgccggctccggcaagcctgtcgtcccgggggcaccg
gggacgcccgggacgccggtggtctcggtcgacggtgtcgcggcgctgagcatgctcgag
cctgggacgtaccgcttcgacgtgacgtggcaggacgacgacggggtccagctcacaggg
tcgatcgccggcatcgagctggccttcaaccaggagcgcacgacgcagctcgtgctcacc
cgcacggtgcgggtgttccaaggcgcactcatgacccagctgaccgcaggcatccagaca
ccggtcgaggaccgtgaggtcgtggtcaccgggatcatcggctacgacggcgtgacgccc
gtccgctcgagcgtcacgctcgtcaccgacgacgacggccagttcgcgacctcggcgacg
cccgacacgagcggctacctgccgctcgtgtcggacaaggtcgacgtgacggtcgccgcg
aggacggaggctcccttcgactacaaggccctctcgctcaccggggtggacttcgtctcg
ggcacgtccacgatcatcgagctccagccggtcgggcagcccttctccgggacgctcacg
ctcgccggggacggtccggacgcgagggcacccgcctcgcaggtgctcttcgaggtcgtc
tccggtccgccgggcgcgtcctcggtgagcatttccgcggtcaccacggccagcggcacg
tccttcccgctgctgtggcgggacgccaaccagcctgccagcggtgcgggcaccctcgcc
cggccaggcacctacgtggtccgcgcgactctcgcgggccacgagcctgtgcaggagacg
atcgacgtggtcgtcgagacggggaacgccccggtgaccttcaagctcgcccggttcgga
agcctcaccgtcgcgccggtcacgtgctcagaacccctcaccgtgccgccgtgcggggac
gtcgggacgacccccgtgcccagggccgagatcacggtgagcggcaacggcatccagcag
accgcgaccctggcgcagggcacgcccgaggcggagttcggcgagctgccctccggggac
taccgcgtcgtcgtgcgggccgccggcatggcacgtctgaccaccacgctcaccgtcaag
gccgaagacaccgacgcgcagcccgtcttcctcacgaggctcggcacgatcagagggacc
gtgtggtcgacgacggcgcgcgccggcgacccagatggcaccagaccggtcctccgaaag
ctcccgggagcggtcgtcacggccaccggcccggggggagcggagttcaccgtggtcacg
gacgccgacggggcctactcgatcaccggcacggcagccctcgaagggctgcagacgggc
aggtggagcgtccaggcgcgcctggacggctacacggcaccgccagcccagacggtggac
gtcaccggacccggcacgttcgagaaagacgtcacgatgccgttcacgcccgtgaccgtc
acggtgttcgtggtgaacgacctcatcgacggcgaggccgtcccggggctcgacgtcgtc
ctgcaggacggcatcaggtccgtgcccgccacgtgcccgccggtcgcgacagggtcagcg
accaccacctgcgaccgtggcgagtaccggttccccgacgtgctgcccgtgcagtcgatc
ctgtcgatctccggcgcgggctaccggtcgttgcaggtgagcatcaccccaccggtgggt
cagccgaactcggcggtcaccgtgccactcgtcgcgaacaccaacgccatcggcggcatc
gtcacggggcagcgcggctcggggacaccggtcccgctcaaggacgagacggtgcgcctg
accgccgtgcccgcggcgccgacggacccggacgcaccggtggacccgccagtcacgtcg
gacaccatgacaggggtcgacggcagcttcctgttccgcgacctcaccgacggtgcctac
gacatctcggtcgaggccgcgggctacagcccggtgacccggcgggtcaccgtggtcgga
gggcaggcggccctcgtggacctccggctgttccaggtgacccgagccgtcacggtctcc
gtcacgtcgggctccgacctcacgggcacgctcgtgtccctcacggcgcaggacggcacg
acgctgccgggcaccatcgcggggcagcccctggtccggtccggagcgacgtacacgacc
atcttcaaccaggtgcccgagggcgcgtggacggccaccttcacgggggcgtccgggcac
ccgtggtcgaccacccgggtcctcgacgccggggacaccaccctcgaggcgaccatcgac
gaggtgcggctgcgtctcgcggcgaccgggcccgacagcggcgcgcagctgacagtgacc
gtcgagggcagcccttcggacaccgacggtgccatcgtcgacctcacgaggacagtctcg
gtcggggcgtcggcagagacgctctacctcctcgccggcacctacgagctcacaccgagc
acggtggccggggcgaccgtctccccggcgacggtgacgatcgcaccgagcgagtccgac
cgtctggtgaccttcgcggtccagagccccagcacgaccacccttcctgcgctgacggac
tgggagatcggcaccgccaagaccctcgtcgcgaccgtgcgcgggccgcagtcctcggcg
gcgaccgcgaccgggactgtgaccttctccctcgccgggaccgagctggacgtcgtggcc
gtcgatgcggcgggccgggcgacgctcagcgggaccctcccggccgggaccgtcccgggg
gcgaccgaggtgacggcggtgtactccgggtcgacgtcgctcgcgggctcccaggcgtcc
aggacggtgaccgtcaccgcggccgggaccaccaccaccctggccgccccgggacccctg
accgtcgggaccccgacgactctcagcgccacggtctccgccccgagcgggggcacggtc
acggggtcggtcgagttcctccggggcggggacgtcgtcgccaccggtaccctcgccgga
ggcaccgcgacggcttccttcacccccacgagcgcgggtccggcgacgctgtctgcccgc
ttcgtcgcctcgggctcctacgccgcgtcgacgagcgcggggcgctcggtcacggctgcg
agggggccgtcgaccacgacggcgacagcgcccgctgcggtcggcggtgacgtcacggcg
cgggtcgcctggggtggggcgccggccacggccgggacggtggaggtctcgagcccggga
ggacaggtctcctgccctgccgtctcgctgacggacggcgtcgcgtcctgctcgaccgca
gggctccccgccggtacccacacgatcacggtcgtctacagcgggacggtcgaccggctc
gggtcgcagaccaccgtccaggtcgtggtgccggcggcaccgccggagccgggagagacc
gaggacccggacgacgggaccccgtga
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