Sanguibacter keddieii: Sked_27940
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Entry
Sked_27940 CDS
T01214
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ske
Sanguibacter keddieii
Pathway
ske00260
Glycine, serine and threonine metabolism
ske00460
Cyanoamino acid metabolism
ske00630
Glyoxylate and dicarboxylate metabolism
ske00670
One carbon pool by folate
ske00680
Methane metabolism
ske01100
Metabolic pathways
ske01110
Biosynthesis of secondary metabolites
ske01120
Microbial metabolism in diverse environments
ske01200
Carbon metabolism
ske01230
Biosynthesis of amino acids
ske01240
Biosynthesis of cofactors
ske04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sked_27940
09102 Energy metabolism
00680 Methane metabolism
Sked_27940
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sked_27940
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sked_27940
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sked_27940
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sked_27940
Enzymes [BR:
ske01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sked_27940
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
ACZ22696
UniProt:
D1BAZ5
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Position
complement(3115244..3116536)
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AA seq
430 aa
AA seq
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MTALNENTVMNQGIAQVDPEIAAVLDGELARQRDTLEMIASENFVPRAVLEAQGSVLTNK
YAEGYPGKRYYGGCEQVDIAETLAIQRVKALYGAEHANVQPHSGATANAAVLHALISKGD
KILGLELAHGGHLTHGMKINFSGRLYEVAAYGVDPETHLVDMDKVRETALAERPDVIIGG
WSAYPRHLDFAAFRSIADEVGAKLWVDMAHFAGLVAADLHPNPVQHADVVSSTVHKTIGG
PRSGFILSREEYAKKIDSAVFPGQQGGPLMHVVAAKAVAFKIAASEEFAERQHRVLRGAK
IIADRLTAADVTEAGVSVLTGGTDVHLVLVDLRHSELDGQQAEDLLHAVGITVNRNAVPF
DPRPPRVTSGLRIGTPALAARGFGDEEFTEVADIIATALKGGAATDVESLKARVDKLTGD
FPLYPGLQQY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctctgaacgagaacaccgtcatgaaccagggcatcgcccaggtcgaccccgag
atcgccgccgtcctcgacggggagctcgcgcgtcagcgcgacaccctcgagatgatcgcc
tccgagaacttcgtgccgcgcgccgtgctcgaggcccagggctcggtcctcaccaacaag
tacgccgagggctaccccggcaagcgctactacggtggctgcgagcaggtcgacatcgcc
gagacccttgccatccagcgggtcaaggccctctacggcgccgagcacgcgaacgtccag
ccgcactccggcgcgacggccaacgccgctgtgctgcacgcgctcatctccaagggcgac
aagatcctcggcctcgagctcgcgcacggcgggcacctcacgcacggcatgaagatcaac
ttctccgggcgcctctacgaggtcgccgcgtacggcgtcgaccccgagacccacctcgtc
gacatggacaaggtccgcgagaccgccctcgccgagcgccccgacgtcatcatcggcggc
tggtccgcgtacccgcgccacctcgacttcgcggccttccgctcgatcgccgacgaggtc
ggcgccaagctctgggtcgacatggcgcacttcgccggcctcgtcgccgcggacctgcac
cccaaccccgtccagcacgccgacgtcgtctcgtcgaccgtgcacaagacgatcggcgga
ccccgctccggcttcatcctgtcccgcgaggagtacgccaagaagatcgactccgccgtg
ttcccgggccagcagggcgggccgctcatgcacgtcgtcgcggccaaggccgtcgcgttc
aagatcgccgcgtccgaggagttcgccgagcgccagcaccgcgtgctgcgcggcgccaag
atcatcgccgaccgcctcaccgcggccgacgtcaccgaggccggcgtctcggtgctcacc
ggcggcaccgacgtgcacctcgtgctcgtcgacctgcgccactcggagctcgacggccag
caggccgaggacctcctgcacgccgtcggcatcaccgtgaaccgcaacgccgtgcccttc
gacccgcgccccccgcgcgtcacctccggcctgcgcatcggcacgccggcgctggccgcc
cgcggcttcggcgacgaggagttcaccgaggtggccgacatcatcgcgaccgcgctcaag
ggcggtgccgcgaccgacgtcgagtcgctcaaggcccgcgtcgacaagctcaccggcgac
ttcccgctgtaccccggcctccagcagtactga
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