KEGG   Sanguibacter keddieii: Sked_28650
Entry
Sked_28650        CDS       T01214                                 
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ske  Sanguibacter keddieii
Pathway
ske03030  DNA replication
ske03430  Mismatch repair
ske03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ske00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sked_28650
   03430 Mismatch repair
    Sked_28650
   03440 Homologous recombination
    Sked_28650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ske03032]
    Sked_28650
   03400 DNA repair and recombination proteins [BR:ske03400]
    Sked_28650
Enzymes [BR:ske01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sked_28650
DNA replication proteins [BR:ske03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sked_28650
DNA repair and recombination proteins [BR:ske03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sked_28650
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ACZ22767
UniProt: D1BBJ6
LinkDB
Position
3203515..3204240
AA seq 241 aa
MTWTTGPMLGFDTETTGVDVSEDRIVSAALVRRHVGTTEVRTWLLDPGVPIPPEASSIHG
ITTEVARAEGQDPAGALDEIAKEIAAALSEGIPVVAFNATFDLCILQAELRRYGLQTLEE
RTGAEVAPVIDPLVLDRAVDRYRRGKRKLVDLCGVYGIEGDGELHTADVDVLATLDVLGA
MVTQYPEIGARTLQDLHGYQATEHRRWAEDFNAWRDSKGLTGPGAELTWLSDHRQTGPRV
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacctggacgaccggcccgatgctcggcttcgacacggagacgaccggggtggacgtg
tccgaggacaggatcgtctccgctgccctcgtccgtcgccacgtcggcaccaccgaggtc
cggacctggctcctcgaccccggcgtccccatcccgcccgaggcctcgtcgatccacggc
atcacgaccgaggtcgcccgggccgaggggcaggaccccgccggcgcgctcgacgagatc
gcgaaagagatcgccgccgcgctctcggaggggatccctgtcgtggccttcaacgcgacc
ttcgacctgtgcatcctccaggccgagctgcgtcgctacggcctgcagacgctcgaggag
cgcaccggcgcagaggtcgcgcccgtgatcgacccgctcgtgctggaccgcgccgtcgac
cgctaccgacgcggcaagcgcaagctcgtggacctctgcggcgtctacggcatcgagggc
gacggggagctgcacacggccgacgtcgacgtcctcgccacgctcgacgtcctcggcgcc
atggtcacccagtaccccgagatcggtgcccggacgctccaggacctccacggctaccag
gccaccgagcaccgccgctgggcggaggacttcaacgcgtggcgggacagcaaggggctc
accggccccggcgccgagctcacctggctgagcgaccaccggcagaccgggccgcgcgtg
ctctga

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